PDB: 1j79 Compound: dihydroorotase Classification: HYDROLASE Entry date in PDB: 2001-06-20 Resolution [Å]: 1.70 R-Factor: 0.193

CHAIN: A SWISS-PROT/TREMBL: P05020    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Metal-binding    Pyrimidine biosynthesis    Zinc    EC: 3.5.2.3 SCOP: c.1.9.4 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Metallo-dependent hydrolases    Dihydroorotase    Dihydroorotase    Escherichia coli GO:  dihydroorotase activity    hydrolase activity    hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides    pyrimidine base biosynthesis    CHAIN: B SWISS-PROT/TREMBL: P05020    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Metal-binding    Pyrimidine biosynthesis    Zinc    EC: 3.5.2.3 SCOP: c.1.9.4 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Metallo-dependent hydrolases    Dihydroorotase    Dihydroorotase    Escherichia coli GO:  dihydroorotase activity    hydrolase activity    hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides    pyrimidine base biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1j79_A_325 - HA => SUBCLASS : 2.2.1
1j79_A_325 - HA => SUBCLASS : 3.11.1
1j79_A_194 - EH => SUBCLASS : 1.1.3
1j79_A_14 - EH => SUBCLASS : 5.38.1
1j79_A_340 - AR => SUBCLASS : 1.1.5
1j79_A_311 - AR => SUBCLASS : 3.2.1
1j79_A_311 - AR => SUBCLASS : 3.2.7
1j79_A_319 - AR => SUBCLASS : 3.16.1
1j79_A_274 - HH => SUBCLASS : 1.3.9
1j79_A_200 - HH => SUBCLASS : 2.1.10
1j79_A_200 - HH => SUBCLASS : 2.1.23
1j79_A_200 - HH => SUBCLASS : 2.3.6

Loops in ArchDB95 clusters

1j79_A_194 - EH => SUBCLASS : 1.1.4
1j79_A_14 - EH => SUBCLASS : 5.55.1
1j79_A_340 - AR => SUBCLASS : 1.2.11
1j79_A_340 - AR => SUBCLASS : 2.4.1
1j79_A_311 - AR => SUBCLASS : 3.1.6
1j79_A_311 - AR => SUBCLASS : 3.1.8
1j79_A_311 - AR => SUBCLASS : 3.1.21
1j79_A_319 - AR => SUBCLASS : 3.8.5
1j79_A_274 - HH => SUBCLASS : 1.3.8
1j79_A_200 - HH => SUBCLASS : 2.1.16
1j79_A_325 - HA => SUBCLASS : 2.2.11
1j79_A_325 - HA => SUBCLASS : 3.1.1
1j79_A_325 - HA => SUBCLASS : 3.9.2

Loops in ArchDB-EC clusters

1j79_A_200 - HH => SUBCLASS : 2.3.3

Loops not clustered in ArchDB

1j79_A_340 - AR
1j79_A_331 - AR
1j79_A_319 - AR
1j79_A_311 - AR
1j79_A_6 - AR
1j79_A_331 - AR
1j79_A_6 - AR
1j79_A_38 - EH
1j79_A_73 - EH
1j79_A_98 - EH
1j79_A_136 - EH
1j79_A_173 - EH
1j79_A_245 - EH
1j79_A_325 - HA
1j79_A_86 - HE
1j79_A_22 - HE
1j79_A_298 - HE
1j79_A_52 - HE
1j79_A_228 - HE
1j79_A_181 - HE
1j79_A_161 - HE
1j79_A_123 - HE
1j79_A_256 - HH
1j79_A_207 - HH
1j79_A_152 - HH
1j79_A_291 - HH

1j79 A - percentage of sequence identity: 100
1j79 B - percentage of sequence identity: 100
1xge A - percentage of sequence identity: 99
1xge B - percentage of sequence identity: 99