PDB: 1jag Compound: deoxyguanosine kinase Classification: TRANSFERASE Entry date in PDB: 2001-12-05 Resolution [Å]: 2.80 R-Factor: 0.265

CHAIN: A SWISS-PROT/TREMBL: Q16854    KEYWORD: 3D-structure    Alternative splicing    ATP-binding    Kinase    Mitochondrion    Transferase    Transit peptide    EC: 2.7.1.113 SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Deoxyguanosine kinase    Human (Homo sapiens) GO:  ATP binding    phosphotransferase activity, alcohol group as acceptor    nucleobase, nucleoside, nucleotide and nucleic acid metabolism    CHAIN: B SWISS-PROT/TREMBL: Q16854    KEYWORD: 3D-structure    Alternative splicing    ATP-binding    Kinase    Mitochondrion    Transferase    Transit peptide    EC: 2.7.1.113 SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Deoxyguanosine kinase    Human (Homo sapiens) GO:  ATP binding    phosphotransferase activity, alcohol group as acceptor    nucleobase, nucleoside, nucleotide and nucleic acid metabolism    CHAIN: C SWISS-PROT/TREMBL: Q16854    KEYWORD: 3D-structure    Alternative splicing    ATP-binding    Kinase    Mitochondrion    Transferase    Transit peptide    EC: 2.7.1.113 SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Deoxyguanosine kinase    Human (Homo sapiens) GO:  ATP binding    phosphotransferase activity, alcohol group as acceptor    nucleobase, nucleoside, nucleotide and nucleic acid metabolism    CHAIN: D SWISS-PROT/TREMBL: Q16854    KEYWORD: 3D-structure    Alternative splicing    ATP-binding    Kinase    Mitochondrion    Transferase    Transit peptide    EC: 2.7.1.113 SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Deoxyguanosine kinase    Human (Homo sapiens) GO:  ATP binding    phosphotransferase activity, alcohol group as acceptor    nucleobase, nucleoside, nucleotide and nucleic acid metabolism    CHAIN: E SWISS-PROT/TREMBL: Q16854    KEYWORD: 3D-structure    Alternative splicing    ATP-binding    Kinase    Mitochondrion    Transferase    Transit peptide    EC: 2.7.1.113 SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Deoxyguanosine kinase    Human (Homo sapiens) GO:  ATP binding    phosphotransferase activity, alcohol group as acceptor    nucleobase, nucleoside, nucleotide and nucleic acid metabolism    CHAIN: F SWISS-PROT/TREMBL: Q16854    KEYWORD: 3D-structure    Alternative splicing    ATP-binding    Kinase    Mitochondrion    Transferase    Transit peptide    EC: 2.7.1.113 SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Deoxyguanosine kinase    Human (Homo sapiens) GO:  ATP binding    phosphotransferase activity, alcohol group as acceptor    nucleobase, nucleoside, nucleotide and nucleic acid metabolism    CHAIN: G SWISS-PROT/TREMBL: Q16854    KEYWORD: 3D-structure    Alternative splicing    ATP-binding    Kinase    Mitochondrion    Transferase    Transit peptide    EC: 2.7.1.113 SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Deoxyguanosine kinase    Human (Homo sapiens) GO:  ATP binding    phosphotransferase activity, alcohol group as acceptor    nucleobase, nucleoside, nucleotide and nucleic acid metabolism    CHAIN: H SWISS-PROT/TREMBL: Q16854    KEYWORD: 3D-structure    Alternative splicing    ATP-binding    Kinase    Mitochondrion    Transferase    Transit peptide    EC: 2.7.1.113 SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Deoxyguanosine kinase    Human (Homo sapiens) GO:  ATP binding    phosphotransferase activity, alcohol group as acceptor    nucleobase, nucleoside, nucleotide and nucleic acid metabolism

Image Source: PDB

Loops in ArchDB-EC clusters

1jag_A_151 - HH => SUBCLASS : 4.1.2

Loops in ArchDB-KI clusters

1jag_A_188 - EH => SUBCLASS : 1.1.2
1jag_A_39 - EH => SUBCLASS : 6.2.1

Loops not clustered in ArchDB

1jag_A_39 - EH
1jag_A_66 - EH
1jag_A_137 - EH
1jag_A_188 - EH
1jag_A_247 - EH
1jag_A_216 - HE
1jag_A_181 - HE
1jag_A_128 - HE
1jag_A_51 - HE
1jag_A_95 - HH
1jag_A_103 - HH
1jag_A_144 - HH
1jag_A_163 - HH
1jag_A_196 - HH

Loops not clustered in ArchDB-KI

1jag_A_137 - EH
1jag_A_247 - EH
1jag_A_66 - EH
1jag_A_181 - HE
1jag_A_51 - HE
1jag_A_128 - HE
1jag_A_216 - HE
1jag_A_163 - HH
1jag_A_144 - HH
1jag_A_151 - HH
1jag_A_196 - HH
1jag_A_95 - HH
1jag_A_103 - HH

1jag A - percentage of sequence identity: 100
1jag B - percentage of sequence identity: 100
1jag C - percentage of sequence identity: 100
1jag D - percentage of sequence identity: 100
1jag E - percentage of sequence identity: 100
1jag F - percentage of sequence identity: 100
1jag G - percentage of sequence identity: 100
1jag H - percentage of sequence identity: 100