PDB: 1jb0 Compound: photosystem i p700 chlorophyll a apoprotein a1 Classification: PHOTOSYNTHESIS Entry date in PDB: 2001-08-01 Resolution [Å]: 2.50 R-Factor: 0.199

CHAIN: A SWISS-PROT/TREMBL: P25896    KEYWORD: 3D-structure    4Fe-4S    Chlorophyll    Complete proteome    Electron transport    Iron    Iron-sulfur    Magnesium    Metal-binding    Photosynthesis    Photosystem I    Thylakoid    Transmembrane    Transport    SCOP: f.29.1.1 Membrane and cell surface proteins and peptides    Photosystem I subunits PsaA/PsaB    Photosystem I subunits PsaA/PsaB    Photosystem I subunits PsaA/PsaB    Apoprotein a1, PsaA    Synechococcus elongatus GO:  integral to membrane    photosystem I    thylakoid    metal ion binding    electron transport    photosynthesis    CHAIN: B SWISS-PROT/TREMBL: P25897    KEYWORD: 3D-structure    4Fe-4S    Chlorophyll    Complete proteome    Electron transport    Iron    Iron-sulfur    Magnesium    Metal-binding    Photosynthesis    Photosystem I    Thylakoid    Transmembrane    Transport    SCOP: f.29.1.1 Membrane and cell surface proteins and peptides    Photosystem I subunits PsaA/PsaB    Photosystem I subunits PsaA/PsaB    Photosystem I subunits PsaA/PsaB    Apoprotein a2, PsaB    Synechococcus elongatus GO:  integral to membrane    photosystem I    thylakoid    electron transport    photosynthesis    CHAIN: C SWISS-PROT/TREMBL: P18083    KEYWORD: 3D-structure    4Fe-4S    Complete proteome    Electron transport    Iron    Iron-sulfur    Metal-binding    Photosynthesis    Photosystem I    Repeat    Thylakoid    Transport    SCOP: d.58.1.4 Alpha and beta proteins (a+b)    Ferredoxin-like    4Fe-4S ferredoxins    Single 4Fe-4S cluster ferredoxin    Photosystem I iron-sulfur protein PsaC    Synechococcus elongatus GO:  electron transporter activity    iron ion binding    electron transport    CHAIN: D SWISS-PROT/TREMBL: P20452    KEYWORD: 3D-structure    Complete proteome    Photosynthesis    Photosystem I    SCOP: d.187.1.1 Alpha and beta proteins (a+b)    Photosystem I subunit PsaD    Photosystem I subunit PsaD    Photosystem I subunit PsaD    Photosystem I subunit PsaD    Synechococcus elongatus GO:  photosystem I reaction center    photosynthesis    CHAIN: E SWISS-PROT/TREMBL: P25898    KEYWORD: 3D-structure    Complete proteome    Membrane    Photosynthesis    Photosystem I    Thylakoid    SCOP: b.34.4.2 All beta proteins    SH3-like barrel    Electron transport accessory proteins    Photosystem I accessory protein E (PsaE)    Photosystem I accessory protein E (PsaE)    Synechococcus elongatus GO:  photosystem I reaction center    electron transport    CHAIN: F SWISS-PROT/TREMBL: P25899    KEYWORD: 3D-structure    Complete proteome    Photosynthesis    Photosystem I    Signal    SCOP: f.23.16.1 Membrane and cell surface proteins and peptides    Single transmembrane helix    Subunit III of photosystem I reaction centre, PsaF    Subunit III of photosystem I reaction centre, PsaF    Subunit III of photosystem I reaction centre, PsaF    Synechococcus elongatus GO:  photosystem I reaction center    photosynthesis    CHAIN: I SWISS-PROT/TREMBL: P25900    KEYWORD: 3D-structure    Complete proteome    Photosynthesis    Photosystem I    Transmembrane    SCOP: f.23.17.1 Membrane and cell surface proteins and peptides    Single transmembrane helix    Subunit VIII of photosystem I reaction centre, PsaI    Subunit VIII of photosystem I reaction centre, PsaI    Subunit VIII of photosystem I reaction centre, PsaI    Synechococcus elongatus GO:  photosystem I    photosynthesis    CHAIN: J SWISS-PROT/TREMBL: P25901    KEYWORD: 3D-structure    Complete proteome    Photosynthesis    Photosystem I    Transmembrane    SCOP: f.23.18.1 Membrane and cell surface proteins and peptides    Single transmembrane helix    Subunit IX of photosystem I reaction centre, PsaJ    Subunit IX of photosystem I reaction centre, PsaJ    Subunit IX of photosystem I reaction centre, PsaJ    Synechococcus elongatus GO:  photosystem I    photosynthesis    CHAIN: K SWISS-PROT/TREMBL: P20453    KEYWORD: 3D-structure    Complete proteome    Photosynthesis    Photosystem I    Thylakoid    Transmembrane    SCOP: f.30.1.1 Membrane and cell surface proteins and peptides    Photosystem I reaction center subunit X, PsaK    Photosystem I reaction center subunit X, PsaK    Photosystem I reaction center subunit X, PsaK    Photosystem I reaction center subunit X, PsaK    Synechococcus elongatus GO:  membrane    photosystem I    photosynthesis    CHAIN: L SWISS-PROT/TREMBL: P25902    KEYWORD: Photosynthesis    Photosystem I    Thylakoid    Transmembrane    SCOP: f.31.1.1 Membrane and cell surface proteins and peptides    Photosystem I reaction center subunit XI, PsaL    Photosystem I reaction center subunit XI, PsaL    Photosystem I reaction center subunit XI, PsaL    Photosystem I reaction center subunit XI, PsaL    Synechococcus elongatus GO:  photosystem I reaction center    photosynthesis    CHAIN: M SWISS-PROT/TREMBL: P25903    KEYWORD: 3D-structure    Complete proteome    Photosynthesis    Photosystem I    SCOP: f.23.19.1 Membrane and cell surface proteins and peptides    Single transmembrane helix    Subunit XII of photosystem I reaction centre, PsaM    Subunit XII of photosystem I reaction centre, PsaM    Subunit XII of photosystem I reaction centre, PsaM    Synechococcus elongatus GO:  photosystem I    photosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1jb0_C_15 - HE => SUBCLASS : 6.10.1
1jb0_A_128 - HA => SUBCLASS : 2.4.5
1jb0_D_81 - HA => SUBCLASS : 3.1.1
1jb0_A_623 - HA => SUBCLASS : 3.1.1
1jb0_D_37 - HA => SUBCLASS : 5.22.1
1jb0_A_183 - EH => SUBCLASS : 1.1.8
1jb0_D_52 - EH => SUBCLASS : 2.1.1
1jb0_E_57 - AR => SUBCLASS : 3.4.1
1jb0_E_57 - AR => SUBCLASS : 4.2.1
1jb0_A_187 - HH => SUBCLASS : 1.1.15
1jb0_J_2 - HH => SUBCLASS : 1.1.38
1jb0_A_344 - HH => SUBCLASS : 1.2.1
1jb0_A_344 - HH => SUBCLASS : 1.2.2
1jb0_A_241 - HH => SUBCLASS : 1.2.3
1jb0_A_241 - HH => SUBCLASS : 1.2.4
1jb0_A_670 - HH => SUBCLASS : 2.1.5
1jb0_F_96 - HH => SUBCLASS : 3.17.1
1jb0_A_143 - HH => SUBCLASS : 4.2.2
1jb0_A_143 - HH => SUBCLASS : 4.6.2

Loops in ArchDB95 clusters

1jb0_D_52 - EH => SUBCLASS : 2.1.1
1jb0_C_3 - EH => SUBCLASS : 8.29.1
1jb0_E_57 - AR => SUBCLASS : 3.2.4
1jb0_E_57 - AR => SUBCLASS : 4.4.1
1jb0_A_187 - HH => SUBCLASS : 1.1.20
1jb0_J_2 - HH => SUBCLASS : 1.1.49
1jb0_A_344 - HH => SUBCLASS : 1.2.1
1jb0_A_670 - HH => SUBCLASS : 2.1.16
1jb0_F_96 - HH => SUBCLASS : 3.9.2
1jb0_A_143 - HH => SUBCLASS : 4.5.2
1jb0_A_143 - HH => SUBCLASS : 4.16.1
1jb0_D_20 - HE => SUBCLASS : 0.1.74
1jb0_C_15 - HE => SUBCLASS : 6.31.1
1jb0_A_128 - HA => SUBCLASS : 2.5.2
1jb0_D_81 - HA => SUBCLASS : 3.1.1
1jb0_A_623 - HA => SUBCLASS : 3.1.1
1jb0_D_37 - HA => SUBCLASS : 5.19.1

Loops not clustered in ArchDB

1jb0_A_113 - AR
1jb0_D_26 - AR
1jb0_D_46 - AR
1jb0_F_6 - EH
1jb0_A_16 - EH
1jb0_A_134 - EH
1jb0_A_523 - EH
1jb0_A_631 - EH
1jb0_L_17 - EH
1jb0_C_37 - EH
1jb0_D_91 - EH
1jb0_F_42 - EH
1jb0_E_20 - HA
1jb0_E_36 - HA
1jb0_C_26 - HA
1jb0_A_518 - HA
1jb0_E_6 - HA
1jb0_L_6 - HA
1jb0_A_591 - HE
1jb0_A_485 - HE
1jb0_A_155 - HE
1jb0_A_100 - HE
1jb0_F_30 - HE
1jb0_C_52 - HE
1jb0_D_61 - HE
1jb0_A_659 - HH
1jb0_A_654 - HH
1jb0_A_646 - HH
1jb0_A_639 - HH
1jb0_A_569 - HH
1jb0_A_533 - HH
1jb0_A_694 - HH
1jb0_K_21 - HH
1jb0_L_20 - HH
1jb0_L_25 - HH
1jb0_L_43 - HH
1jb0_L_60 - HH
1jb0_L_74 - HH
1jb0_L_114 - HH
1jb0_A_437 - HH
1jb0_A_429 - HH
1jb0_F_64 - HH
1jb0_F_103 - HH
1jb0_I_10 - HH
1jb0_A_46 - HH
1jb0_A_65 - HH
1jb0_A_193 - HH
1jb0_A_204 - HH
1jb0_A_220 - HH
1jb0_A_246 - HH
1jb0_A_294 - HH
1jb0_A_325 - HH
1jb0_A_352 - HH
1jb0_A_387 - HH
1jb0_F_12 - HH

1k0t A - percentage of sequence identity: 96
null nu - percentage of sequence identity: 0