ArchDB - Biological DataBase of Protein Loops

Information on 1jou

PDB: 1jou
Compound: thrombin, light chain
Classification: BLOOD CLOTTING
Entry date in PDB: 2001-08-10
Resolution [Å]: 1.80
R-Factor: 0.222

CHAIN: A

SWISS-PROT/TREMBL: P00734
   KEYWORD: 3D-structure    Acute phase    Blood coagulation    Calcium-binding    Disease mutation    Gamma-carboxyglutamic acid    Glycoprotein    Hydrolase    Kringle    Plasma    Polymorphism    Repeat    Serine protease    Signal    Vitamin K    Zymogen
EC: 3.4.21.5
SCOP: b.47.1.2 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Eukaryotic proteases    Thrombin    Human (Homo sapiens)
GO:  extracellular region    calcium ion binding    chymotrypsin activity    thrombin activity    trypsin activity    blood coagulation    proteolysis and peptidolysis

CHAIN: B

CHAIN: C

CHAIN: D

CHAIN: E

CHAIN: F

Image Source: PDB

Stored Loops of 1jou

Loops in ArchDB95 clusters

1jou_B_20 - AR => SUBCLASS : 8.3.1
1jou_B_180 - AR => SUBCLASS : 19.1.1
1jou_B_39 - HA => SUBCLASS : 4.2.1
1jou_B_198 - HA => SUBCLASS : 6.2.1

Loops not clustered in ArchDB

1jou_B_60 - AR
1jou_B_51 - EH
1jou_B_226 - EH
1jou_B_156 - EH
1jou_B_104 - EH
1jou_B_30 - HA
1jou_B_207 - HA
1jou_B_135 - HA
1jou_B_81 - HA
1jou_B_64 - HA
1jou_B_59 - HA
1jou_B_56 - HE
1jou_B_126 - HE
1jou_B_165 - HE
1jou_A_1 - HH

Homologous structures to 1jou classified in ArchDB

1a0h B - percentage of sequence identity: 87
1a0h E - percentage of sequence identity: 87
1a2c H - percentage of sequence identity: 99
1a3b H - percentage of sequence identity: 99
1a3e H - percentage of sequence identity: 99
1a46 H - percentage of sequence identity: 99
1a4w H - percentage of sequence identity: 99
1a5g H - percentage of sequence identity: 99
1a61 H - percentage of sequence identity: 99
1abi H - percentage of sequence identity: 99
1abj H - percentage of sequence identity: 99
1ad8 H - percentage of sequence identity: 99
1ae8 H - percentage of sequence identity: 99
1afe H - percentage of sequence identity: 99
1aht H - percentage of sequence identity: 99
1ai8 H - percentage of sequence identity: 99
1aix H - percentage of sequence identity: 99
1avg H - percentage of sequence identity: 87
1awf H - percentage of sequence identity: 99
1awh B - percentage of sequence identity: 99
1awh D - percentage of sequence identity: 99
1ay6 H - percentage of sequence identity: 99
1b5g H - percentage of sequence identity: 99
1b7x B - percentage of sequence identity: 99
1ba8 B - percentage of sequence identity: 99
1bb0 B - percentage of sequence identity: 99
1bbr E - percentage of sequence identity: 89
1bbr H - percentage of sequence identity: 85
1bbr K - percentage of sequence identity: 87
1bbr N - percentage of sequence identity: 87
1bcu H - percentage of sequence identity: 99
1bhx B - percentage of sequence identity: 100
1bhx F - percentage of sequence identity: 99
1bmm H - percentage of sequence identity: 99
1bmn H - percentage of sequence identity: 99
1bth H - percentage of sequence identity: 98
1bth K - percentage of sequence identity: 98
1c1u H - percentage of sequence identity: 99
1c1v H - percentage of sequence identity: 99
1c1w H - percentage of sequence identity: 99
1c4u 2 - percentage of sequence identity: 99
1c4v 2 - percentage of sequence identity: 99
1c4y 2 - percentage of sequence identity: 99
1c5l H - percentage of sequence identity: 99
1c5n H - percentage of sequence identity: 99
1c5o H - percentage of sequence identity: 99
1ca8 B - percentage of sequence identity: 99
1d3d B - percentage of sequence identity: 99
1d3p B - percentage of sequence identity: 99
1d3q B - percentage of sequence identity: 99
1d3t B - percentage of sequence identity: 99
1d4p B - percentage of sequence identity: 99
1d6w A - percentage of sequence identity: 99
1d9i A - percentage of sequence identity: 99
1de7 H - percentage of sequence identity: 99
1de7 K - percentage of sequence identity: 99
1dit H - percentage of sequence identity: 99
1dm4 B - percentage of sequence identity: 100
1doj A - percentage of sequence identity: 99
1dwb H - percentage of sequence identity: 99
1dwc H - percentage of sequence identity: 99
1dwd H - percentage of sequence identity: 99
1dwe H - percentage of sequence identity: 99
1dx5 M - percentage of sequence identity: 99
1dx5 N - percentage of sequence identity: 99
1dx5 O - percentage of sequence identity: 99
1dx5 P - percentage of sequence identity: 99
1e0f D - percentage of sequence identity: 99
1e0f E - percentage of sequence identity: 99
1e0f F - percentage of sequence identity: 99
1eb1 H - percentage of sequence identity: 99
1eoj A - percentage of sequence identity: 99
1eol A - percentage of sequence identity: 99
1etr H - percentage of sequence identity: 87
1ets H - percentage of sequence identity: 87
1ett H - percentage of sequence identity: 87
1fpc H - percentage of sequence identity: 99
1fph H - percentage of sequence identity: 99
1g30 B - percentage of sequence identity: 99
1g32 B - percentage of sequence identity: 99
1g37 A - percentage of sequence identity: 99
1ghv H - percentage of sequence identity: 99
1ghw H - percentage of sequence identity: 99
1ghx H - percentage of sequence identity: 99
1ghy H - percentage of sequence identity: 99
1gj4 H - percentage of sequence identity: 99
1gj5 H - percentage of sequence identity: 99
1h8d H - percentage of sequence identity: 96
1h8i H - percentage of sequence identity: 97
1hag E - percentage of sequence identity: 99
1hah H - percentage of sequence identity: 99
1hai H - percentage of sequence identity: 99
1hao H - percentage of sequence identity: 99
1hap H - percentage of sequence identity: 99
1hbt H - percentage of sequence identity: 99
1hdt H - percentage of sequence identity: 99
1hgt H - percentage of sequence identity: 99
1hlt H - percentage of sequence identity: 99
1hlt K - percentage of sequence identity: 99
1hrt H - percentage of sequence identity: 87
1hut H - percentage of sequence identity: 99
1hxe H - percentage of sequence identity: 99
1hxf H - percentage of sequence identity: 99
1id5 H - percentage of sequence identity: 87
1ihs H - percentage of sequence identity: 99
1iht H - percentage of sequence identity: 99
1jmo H - percentage of sequence identity: 100
1jou B - percentage of sequence identity: 100
1jou D - percentage of sequence identity: 100
1jou F - percentage of sequence identity: 100
1jwt A - percentage of sequence identity: 99
1k21 H - percentage of sequence identity: 99
1k22 H - percentage of sequence identity: 99
1kts B - percentage of sequence identity: 99
1ktt B - percentage of sequence identity: 99
1lhc H - percentage of sequence identity: 99
1lhd H - percentage of sequence identity: 99
1lhe H - percentage of sequence identity: 99
1lhf H - percentage of sequence identity: 99
1lhg H - percentage of sequence identity: 99
1mh0 A - percentage of sequence identity: 99
1mh0 B - percentage of sequence identity: 99
1mkw H - percentage of sequence identity: 87
1mkw K - percentage of sequence identity: 87
1mkx H - percentage of sequence identity: 87
1mkx K - percentage of sequence identity: 87
1mu6 B - percentage of sequence identity: 99
1mu8 B - percentage of sequence identity: 99
1mue B - percentage of sequence identity: 99
1nm6 A - percentage of sequence identity: 99
1no9 H - percentage of sequence identity: 99
1nrn H - percentage of sequence identity: 99
1nro H - percentage of sequence identity: 99
1nrp H - percentage of sequence identity: 99
1nrq H - percentage of sequence identity: 99
1nrr H - percentage of sequence identity: 99
1nrs H - percentage of sequence identity: 99
1nt1 A - percentage of sequence identity: 99
1nu7 B - percentage of sequence identity: 99
1nu7 F - percentage of sequence identity: 99
1nu9 A - percentage of sequence identity: 99
1nu9 D - percentage of sequence identity: 99
1ny2 2 - percentage of sequence identity: 99
1nzq H - percentage of sequence identity: 99
1o0d H - percentage of sequence identity: 99
1o2g H - percentage of sequence identity: 99
1o5g H - percentage of sequence identity: 99
1ook B - percentage of sequence identity: 99
1oyt H - percentage of sequence identity: 99
1p8v C - percentage of sequence identity: 99
1ppb H - percentage of sequence identity: 99
1qbv H - percentage of sequence identity: 99
1qhr B - percentage of sequence identity: 99
1qj1 B - percentage of sequence identity: 99
1qj6 B - percentage of sequence identity: 99
1qj7 B - percentage of sequence identity: 99
1qur H - percentage of sequence identity: 99
1qvh B - percentage of sequence identity: 99
1qvh E - percentage of sequence identity: 99
1rd3 B - percentage of sequence identity: 99
1rd3 D - percentage of sequence identity: 99
1riw B - percentage of sequence identity: 100
1riw C - percentage of sequence identity: 99
1sb1 H - percentage of sequence identity: 99
1sfq B - percentage of sequence identity: 99
1sfq E - percentage of sequence identity: 99
1sg8 B - percentage of sequence identity: 99
1sg8 E - percentage of sequence identity: 99
1sgi B - percentage of sequence identity: 99
1sgi E - percentage of sequence identity: 99
1shh B - percentage of sequence identity: 99
1shh E - percentage of sequence identity: 99
1sl3 A - percentage of sequence identity: 99
1sr5 C - percentage of sequence identity: 99
1t4u H - percentage of sequence identity: 99
1t4v H - percentage of sequence identity: 99
1ta2 A - percentage of sequence identity: 99
1ta6 A - percentage of sequence identity: 99
1tb6 H - percentage of sequence identity: 100
1tbq H - percentage of sequence identity: 87
1tbq K - percentage of sequence identity: 87
1tbr H - percentage of sequence identity: 87
1tbr K - percentage of sequence identity: 87
1tbz H - percentage of sequence identity: 99
1thp B - percentage of sequence identity: 99
1thr H - percentage of sequence identity: 99
1ths H - percentage of sequence identity: 99
1tmb H - percentage of sequence identity: 99
1tmt H - percentage of sequence identity: 99
1tmu H - percentage of sequence identity: 99
1toc B - percentage of sequence identity: 87
1toc D - percentage of sequence identity: 87
1toc F - percentage of sequence identity: 87
1toc H - percentage of sequence identity: 87
1tom H - percentage of sequence identity: 99
1tq0 B - percentage of sequence identity: 98
1tq0 D - percentage of sequence identity: 98
1tq7 B - percentage of sequence identity: 98
1twx B - percentage of sequence identity: 98
1ucy E - percentage of sequence identity: 89
1ucy H - percentage of sequence identity: 85
1ucy K - percentage of sequence identity: 87
1ucy N - percentage of sequence identity: 87
1uma H - percentage of sequence identity: 99
1uvs H - percentage of sequence identity: 99
1uvt H - percentage of sequence identity: 87
1uvu H - percentage of sequence identity: 87
1vit F - percentage of sequence identity: 85
1vit G - percentage of sequence identity: 89
1vit H - percentage of sequence identity: 87
1vr1 H - percentage of sequence identity: 96
1vzq H - percentage of sequence identity: 96
1way B - percentage of sequence identity: 99
1wbg B - percentage of sequence identity: 99
1xm1 A - percentage of sequence identity: 99
1xmn B - percentage of sequence identity: 99
1xmn D - percentage of sequence identity: 99
1xmn F - percentage of sequence identity: 99
1xmn H - percentage of sequence identity: 99
1ycp H - percentage of sequence identity: 87
1ycp K - percentage of sequence identity: 85
1ycp M - percentage of sequence identity: 89
1ype H - percentage of sequence identity: 99
1ypg H - percentage of sequence identity: 99
1ypj H - percentage of sequence identity: 99
1ypk H - percentage of sequence identity: 99
1ypl H - percentage of sequence identity: 99
1ypm H - percentage of sequence identity: 99
1z71 A - percentage of sequence identity: 99
1z8i B - percentage of sequence identity: 99
1z8j B - percentage of sequence identity: 99
1zgi A - percentage of sequence identity: 99
1zgv A - percentage of sequence identity: 99
1zrb A - percentage of sequence identity: 99
2a0q B - percentage of sequence identity: 99
2a0q D - percentage of sequence identity: 99
2a1d B - percentage of sequence identity: 87
2a1d F - percentage of sequence identity: 87
2afq B - percentage of sequence identity: 99
2afq D - percentage of sequence identity: 99
2hgt H - percentage of sequence identity: 99
2hnt C - percentage of sequence identity: 100
2hnt E - percentage of sequence identity: 100
2hnt F - percentage of sequence identity: 99
2hpp H - percentage of sequence identity: 99
2hpq H - percentage of sequence identity: 99
2thf B - percentage of sequence identity: 99
3hat H - percentage of sequence identity: 99
3htc H - percentage of sequence identity: 99
4htc H - percentage of sequence identity: 99
4thn H - percentage of sequence identity: 99
5gds H - percentage of sequence identity: 99
7kme H - percentage of sequence identity: 99
8kme 2 - percentage of sequence identity: 99
null nu - percentage of sequence identity: 0