PDB: 1jx4 Compound: DNA polymerase iv (family y) Classification: TRANSFERASE/DNA Entry date in PDB: 2001-10-05 Resolution [Å]: 1.70 R-Factor: 0.213

CHAIN: A SWISS-PROT/TREMBL: Q97W02    KEYWORD: 3D-structure    Complete proteome    DNA repair    DNA replication    DNA-binding    DNA-directed DNA polymerase    Magnesium    Mutator protein    Transferase    EC: 2.7.7.7 SCOP: d.240.1.1 Alpha and beta proteins (a+b)    Lesion bypass DNA polymerase (Y-family), little finger domain    Lesion bypass DNA polymerase (Y-family), little finger domain    Lesion bypass DNA polymerase (Y-family), little finger domain    DinB homolog (DBH)    Archaeon Sulfolobus solfataricus, DNA polymerase IV SCOP: e.8.1.7 Multi-domain proteins (alpha and beta)    DNA/RNA polymerases    DNA/RNA polymerases    Lesion bypass DNA polymerase (Y-family), catalytic domain    DinB homolog (DBH)    Archaeon Sulfolobus solfataricus, DNA polymerase IV GO:  DNA repair

Image Source: PDB

Loops in ArchDB40 clusters

1jx4_A_61 - HE => SUBCLASS : 4.1.1
1jx4_A_99 - HA => SUBCLASS : 2.2.1
1jx4_A_281 - HA => SUBCLASS : 4.2.1
1jx4_A_41 - EH => SUBCLASS : 1.1.1
1jx4_A_163 - EH => SUBCLASS : 1.1.4
1jx4_A_140 - EH => SUBCLASS : 2.1.22
1jx4_A_3 - EH => SUBCLASS : 2.6.1
1jx4_A_3 - EH => SUBCLASS : 2.6.2
1jx4_A_295 - EH => SUBCLASS : 5.3.1

Loops in ArchDB95 clusters

1jx4_A_140 - EH => SUBCLASS : 2.1.20
1jx4_A_163 - EH => SUBCLASS : 2.2.1
1jx4_A_3 - EH => SUBCLASS : 2.6.1
1jx4_A_295 - EH => SUBCLASS : 5.4.1
1jx4_A_61 - HE => SUBCLASS : 4.1.1
1jx4_A_118 - HE => SUBCLASS : 4.5.1
1jx4_A_99 - HA => SUBCLASS : 2.2.1
1jx4_A_281 - HA => SUBCLASS : 3.1.2

Loops not clustered in ArchDB

1jx4_A_72 - EH
1jx4_A_106 - EH
1jx4_A_244 - EH
1jx4_A_28 - HA
1jx4_A_308 - HE
1jx4_A_258 - HE
1jx4_A_219 - HE
1jx4_A_148 - HE
1jx4_A_78 - HE
1jx4_A_11 - HE
1jx4_A_48 - HH
1jx4_A_168 - HH
1jx4_A_188 - HH
1jx4_A_210 - HH

1jxl A - percentage of sequence identity: 100
1n48 A - percentage of sequence identity: 100
1n56 A - percentage of sequence identity: 100
1n56 B - percentage of sequence identity: 100
1ryr A - percentage of sequence identity: 100
1rys A - percentage of sequence identity: 100
1rys B - percentage of sequence identity: 100
1s0m A - percentage of sequence identity: 100
1s0m B - percentage of sequence identity: 100
1s0n A - percentage of sequence identity: 100
1s0o A - percentage of sequence identity: 100
1s0o B - percentage of sequence identity: 100
1s10 A - percentage of sequence identity: 100
1s97 A - percentage of sequence identity: 100
1s97 B - percentage of sequence identity: 100
1s97 C - percentage of sequence identity: 100
1s97 D - percentage of sequence identity: 100
1s9f A - percentage of sequence identity: 100
1s9f B - percentage of sequence identity: 100
1s9f C - percentage of sequence identity: 100
1s9f D - percentage of sequence identity: 100
2ago A - percentage of sequence identity: 100
2agp A - percentage of sequence identity: 100
2agp B - percentage of sequence identity: 100
2agq A - percentage of sequence identity: 100
2asd A - percentage of sequence identity: 100
2asd B - percentage of sequence identity: 100
2asj A - percentage of sequence identity: 100
2asj B - percentage of sequence identity: 100
2asl A - percentage of sequence identity: 100
2asl B - percentage of sequence identity: 100
2atl A - percentage of sequence identity: 100
2atl B - percentage of sequence identity: 100
2au0 A - percentage of sequence identity: 100
2au0 B - percentage of sequence identity: 100
2bq3 A - percentage of sequence identity: 100
2bqr A - percentage of sequence identity: 100
2bqu A - percentage of sequence identity: 100
2br0 A - percentage of sequence identity: 100
2c22 A - percentage of sequence identity: 100
2c28 A - percentage of sequence identity: 100
2c2d A - percentage of sequence identity: 100
2c2e A - percentage of sequence identity: 100
2c2r A - percentage of sequence identity: 100