PDB: 1kdg Compound: cellobiose dehydrogenase Classification: OXIDOREDUCTASE Entry date in PDB: 2002-11-13 Resolution [Å]: 1.50 R-Factor: 0.135

CHAIN: A SWISS-PROT/TREMBL: Q01738    KEYWORD: 3D-structure    Cellulose degradation    FAD    Flavoprotein    Heme    Multigene family    Oxidoreductase    Signal    EC: 1.1.99.18 SCOP: c.3.1.2 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    FAD-linked reductases, N-terminal domain    Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain    Fungus (Phanerochaete chrysosporium) SCOP: c.3.1.2 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    FAD-linked reductases, N-terminal domain    Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain    Fungus (Phanerochaete chrysosporium) SCOP: d.16.1.1 Alpha and beta proteins (a+b)    FAD-linked reductases, C-terminal domain    FAD-linked reductases, C-terminal domain    GMC oxidoreductases    Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain    Fungus (Phanerochaete chrysosporium) GO:  FAD binding    oxidoreductase activity    oxidoreductase activity, acting on CH-OH group of donors    electron transport    CHAIN: B SWISS-PROT/TREMBL: Q01738    KEYWORD: 3D-structure    Cellulose degradation    FAD    Flavoprotein    Heme    Multigene family    Oxidoreductase    Signal    EC: 1.1.99.18 SCOP: c.3.1.2 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    FAD-linked reductases, N-terminal domain    Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain    Fungus (Phanerochaete chrysosporium) SCOP: c.3.1.2 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    FAD-linked reductases, N-terminal domain    Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain    Fungus (Phanerochaete chrysosporium) SCOP: d.16.1.1 Alpha and beta proteins (a+b)    FAD-linked reductases, C-terminal domain    FAD-linked reductases, C-terminal domain    GMC oxidoreductases    Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain    Fungus (Phanerochaete chrysosporium) GO:  FAD binding    oxidoreductase activity    oxidoreductase activity, acting on CH-OH group of donors    electron transport

Image Source: PDB

Loops in ArchDB40 clusters

1kdg_A_361 - HE => SUBCLASS : 1.1.1
1kdg_A_226 - HE => SUBCLASS : 2.1.1
1kdg_A_410 - HE => SUBCLASS : 3.3.1
1kdg_A_428 - HA => SUBCLASS : 2.3.4
1kdg_A_619 - HA => SUBCLASS : 3.1.1
1kdg_A_565 - HA => SUBCLASS : 3.1.1
1kdg_A_217 - EH => SUBCLASS : 3.2.1
1kdg_A_420 - AR => SUBCLASS : 1.2.3
1kdg_A_483 - HH => SUBCLASS : 1.1.10
1kdg_A_483 - HH => SUBCLASS : 1.1.47

Loops in ArchDB95 clusters

1kdg_A_217 - EH => SUBCLASS : 3.5.1
1kdg_A_420 - AR => SUBCLASS : 2.6.1
1kdg_A_483 - HH => SUBCLASS : 1.1.11
1kdg_A_467 - HH => SUBCLASS : 4.53.1
1kdg_A_361 - HE => SUBCLASS : 1.1.1
1kdg_A_226 - HE => SUBCLASS : 2.1.1
1kdg_A_410 - HE => SUBCLASS : 3.6.1
1kdg_A_428 - HA => SUBCLASS : 2.3.2
1kdg_A_619 - HA => SUBCLASS : 3.1.1
1kdg_A_565 - HA => SUBCLASS : 3.1.1

Loops in ArchDB-EC clusters

1kdg_A_467 - HH => SUBCLASS : 4.35.1

Loops not clustered in ArchDB

1kdg_A_390 - AR
1kdg_A_603 - AR
1kdg_A_420 - AR
1kdg_A_390 - AR
1kdg_A_603 - AR
1kdg_A_242 - EH
1kdg_A_717 - EH
1kdg_A_628 - EH
1kdg_A_402 - EH
1kdg_A_520 - EH
1kdg_A_663 - EH
1kdg_A_453 - EH
1kdg_A_398 - HA
1kdg_A_428 - HA
1kdg_A_437 - HA
1kdg_A_565 - HA
1kdg_A_578 - HA
1kdg_A_376 - HA
1kdg_A_619 - HA
1kdg_A_578 - HA
1kdg_A_437 - HA
1kdg_A_398 - HA
1kdg_A_376 - HA
1kdg_A_544 - HE
1kdg_A_639 - HE
1kdg_A_673 - HE
1kdg_A_493 - HE
1kdg_A_405 - HH
1kdg_A_335 - HH

1kdg A - percentage of sequence identity: 100
1kdg B - percentage of sequence identity: 100
1naa A - percentage of sequence identity: 100
1naa B - percentage of sequence identity: 100