PDB: 1kfs Compound: klenow fragment Classification: COMPLEX (HYDROLASE/DNA) Entry date in PDB: 1998-02-25 Resolution [Å]: 2.10 R-Factor: 0.195

CHAIN: A SWISS-PROT/TREMBL: P00582    KEYWORD: 3D-structure    Complete proteome    DNA repair    DNA replication    DNA-binding    DNA-directed DNA polymerase    Exonuclease    Hydrolase    Nuclease    Transferase    EC: 2.7.7.7 SCOP: c.55.3.5 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Ribonuclease H-like    DnaQ-like 3'-5' exonuclease    Exonuclease domain of prokaryotic DNA polymerase    Escherichia coli SCOP: e.8.1.1 Multi-domain proteins (alpha and beta)    DNA/RNA polymerases    DNA/RNA polymerases    DNA polymerase I    DNA polymerase I (Klenow fragment)    Escherichia coli GO:  intracellular    3'-5' exonuclease activity    5'-3' exonuclease activity    DNA binding    DNA-directed DNA polymerase activity    nuclease activity    nucleic acid binding    DNA replication

Image Source: PDB

Loops in ArchDB40 clusters

1kfs_A_336 - HE => SUBCLASS : 2.3.1
1kfs_A_336 - HE => SUBCLASS : 3.8.2
1kfs_A_398 - HE => SUBCLASS : 5.31.1
1kfs_A_874 - HA => SUBCLASS : 2.3.1
1kfs_A_814 - HA => SUBCLASS : 3.1.1
1kfs_A_352 - HA => SUBCLASS : 8.8.1
1kfs_A_658 - HA => SUBCLASS : 9.2.1
1kfs_A_883 - EH => SUBCLASS : 1.3.1
1kfs_A_331 - EH => SUBCLASS : 2.1.1
1kfs_A_331 - EH => SUBCLASS : 2.1.12
1kfs_A_331 - EH => SUBCLASS : 2.4.1
1kfs_A_699 - EH => SUBCLASS : 2.6.2
1kfs_A_416 - EH => SUBCLASS : 2.6.4
1kfs_A_784 - HH => SUBCLASS : 1.2.1
1kfs_A_491 - HH => SUBCLASS : 1.2.28
1kfs_A_709 - HH => SUBCLASS : 2.2.1
1kfs_A_751 - HH => SUBCLASS : 3.2.2
1kfs_A_721 - HH => SUBCLASS : 3.3.1
1kfs_A_770 - HH => SUBCLASS : 5.22.1
1kfs_A_733 - HH => SUBCLASS : 8.3.1

Loops in ArchDB95 clusters

1kfs_A_883 - EH => SUBCLASS : 1.2.4
1kfs_A_416 - EH => SUBCLASS : 2.6.3
1kfs_A_699 - EH => SUBCLASS : 2.6.4
1kfs_A_331 - EH => SUBCLASS : 3.3.2
1kfs_A_416 - EH => SUBCLASS : 3.11.2
1kfs_A_784 - HH => SUBCLASS : 1.2.1
1kfs_A_709 - HH => SUBCLASS : 2.2.1
1kfs_A_751 - HH => SUBCLASS : 3.1.2
1kfs_A_721 - HH => SUBCLASS : 3.2.1
1kfs_A_770 - HH => SUBCLASS : 5.30.1
1kfs_A_733 - HH => SUBCLASS : 8.8.1
1kfs_A_796 - HE => SUBCLASS : 1.2.6
1kfs_A_336 - HE => SUBCLASS : 2.2.6
1kfs_A_398 - HE => SUBCLASS : 5.24.1
1kfs_A_874 - HA => SUBCLASS : 2.3.1
1kfs_A_814 - HA => SUBCLASS : 3.1.1
1kfs_A_352 - HA => SUBCLASS : 8.15.1
1kfs_A_658 - HA => SUBCLASS : 9.9.1

Loops not clustered in ArchDB

1kfs_A_379 - EH
1kfs_A_438 - EH
1kfs_A_670 - EH
1kfs_A_822 - EH
1kfs_A_916 - EH
1kfs_A_368 - HA
1kfs_A_893 - HE
1kfs_A_833 - HE
1kfs_A_684 - HE
1kfs_A_622 - HE
1kfs_A_421 - HE
1kfs_A_587 - HH
1kfs_A_549 - HH
1kfs_A_530 - HH
1kfs_A_520 - HH
1kfs_A_473 - HH
1kfs_A_458 - HH
1kfs_A_442 - HH
1kfs_A_613 - HH

1d8y A - percentage of sequence identity: 99
1d9d A - percentage of sequence identity: 100
1d9f A - percentage of sequence identity: 100
1dpi - - percentage of sequence identity: 99
1kfd - - percentage of sequence identity: 99
1kln A - percentage of sequence identity: 99
1krp A - percentage of sequence identity: 100
1ksp A - percentage of sequence identity: 100
1qsl A - percentage of sequence identity: 100
2kfz A - percentage of sequence identity: 100
2kzm A - percentage of sequence identity: 100
2kzz A - percentage of sequence identity: 100