PDB: 1kgc Compound: t-cell receptor alpha chain Classification: IMMUNE SYSTEM Entry date in PDB: 2002-12-11 Resolution [Å]: 1.50 R-Factor: 0.211

CHAIN: D SWISS-PROT/TREMBL: P01848    KEYWORD: 3D-structure    Receptor    T-cell    Transmembrane    SCOP: b.1.1.1 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    V set domains (antibody variable domain-like)    T-cell antigen receptor    Human (Homo sapiens), alpha-chain SCOP: b.1.1.2 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    C1 set domains (antibody constant domain-like)    T-cell antigen receptor    Human (Homo sapiens), alpha-chain GO:   CHAIN: E SWISS-PROT/TREMBL: P01850    KEYWORD: 3D-structure    Immunoglobulin domain    Receptor    T-cell    SCOP: b.1.1.1 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    V set domains (antibody variable domain-like)    T-cell antigen receptor    Human (Homo sapiens), beta-chain SCOP: b.1.1.2 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    C1 set domains (antibody constant domain-like)    T-cell antigen receptor    Human (Homo sapiens), beta-chain GO:

Image Source: PDB

Loops in ArchDB40 clusters

1kgc_D_55 - HA => SUBCLASS : 2.2.3
1kgc_D_62 - HA => SUBCLASS : 5.2.1
1kgc_D_3 - AR => SUBCLASS : 2.1.4
1kgc_D_9 - AR => SUBCLASS : 4.1.1
1kgc_D_44 - AR => SUBCLASS : 4.28.1
1kgc_D_72 - AR => SUBCLASS : 8.1.3

Loops in ArchDB95 clusters

1kgc_E_167 - AR => SUBCLASS : 1.2.9
1kgc_D_3 - AR => SUBCLASS : 2.1.9
1kgc_E_10 - AR => SUBCLASS : 4.1.1
1kgc_D_9 - AR => SUBCLASS : 4.1.1
1kgc_D_44 - AR => SUBCLASS : 4.10.2
1kgc_D_44 - AR => SUBCLASS : 4.27.1
1kgc_E_75 - AR => SUBCLASS : 7.1.1
1kgc_D_72 - AR => SUBCLASS : 8.2.1
1kgc_D_110 - AR => SUBCLASS : 8.33.1
1kgc_D_55 - HA => SUBCLASS : 2.2.3
1kgc_E_44 - HA => SUBCLASS : 2.3.2
1kgc_D_62 - HA => SUBCLASS : 5.2.1
1kgc_E_31 - HA => SUBCLASS : 5.3.1
1kgc_D_32 - HA => SUBCLASS : 5.3.1
1kgc_E_88 - HA => SUBCLASS : 7.3.1
1kgc_E_180 - HA => SUBCLASS : 8.5.1

Loops not clustered in ArchDB

1kgc_D_18 - AR
1kgc_E_112 - AR
1kgc_E_107 - AR
1kgc_E_173 - AR
1kgc_E_53 - AR
1kgc_E_19 - AR
1kgc_E_5 - AR
1kgc_D_159 - AR
1kgc_D_137 - AR
1kgc_E_143 - AR
1kgc_D_173 - EH
1kgc_E_127 - EH
1kgc_E_191 - EH
1kgc_E_210 - HA
1kgc_E_158 - HA
1kgc_E_65 - HA
1kgc_D_164 - HA
1kgc_D_124 - HA
1kgc_D_86 - HA
1kgc_E_135 - HE
1kgc_E_201 - HE

1ao7 D - percentage of sequence identity: 64
1fyt D - percentage of sequence identity: 66
1j8h D - percentage of sequence identity: 66
1j8h E - percentage of sequence identity: 68
1mi5 D - percentage of sequence identity: 100
1oga D - percentage of sequence identity: 62
1oga E - percentage of sequence identity: 72
1qrn D - percentage of sequence identity: 62
1qse D - percentage of sequence identity: 63
1qsf D - percentage of sequence identity: 63
1ymm D - percentage of sequence identity: 61
1zgl M - percentage of sequence identity: 61
1zgl Q - percentage of sequence identity: 61
1zgl S - percentage of sequence identity: 61
1zgl U - percentage of sequence identity: 61
2ak4 D - percentage of sequence identity: 63
2ak4 I - percentage of sequence identity: 63
2ak4 N - percentage of sequence identity: 63
2ak4 T - percentage of sequence identity: 63
2bnq D - percentage of sequence identity: 61
2bnr D - percentage of sequence identity: 61
2bnu A - percentage of sequence identity: 60