PDB: 1kho Compound: alpha-toxin Classification: TOXIN Entry date in PDB: 2002-06-19 Resolution [Å]: 2.40 R-Factor: 0.210

CHAIN: A SWISS-PROT/TREMBL: Q9RF12    KEYWORD: 3D-structure    Calcium    Calcium-binding    Hemolysis    Hydrolase    Signal    Toxin    Zinc    EC: 3.1.4.3 SCOP: a.124.1.1 All alpha proteins    Phospholipase C/P1 nuclease    Phospholipase C/P1 nuclease    Phospholipase C    Alpha-toxin, N-terminal domain    Clostridium perfringens, different strains SCOP: b.12.1.3 All beta proteins    Lipase/lipooxygenase domain (PLAT/LH2 domain)    Lipase/lipooxygenase domain (PLAT/LH2 domain)    Alpha-toxin, C-terminal domain    Alpha-toxin, C-terminal domain    Clostridium perfringens, different strains GO:  phospholipase C activity    zinc ion binding    CHAIN: B SWISS-PROT/TREMBL: Q9RF12    KEYWORD: 3D-structure    Calcium    Calcium-binding    Hemolysis    Hydrolase    Signal    Toxin    Zinc    EC: 3.1.4.3 SCOP: a.124.1.1 All alpha proteins    Phospholipase C/P1 nuclease    Phospholipase C/P1 nuclease    Phospholipase C    Alpha-toxin, N-terminal domain    Clostridium perfringens, different strains SCOP: b.12.1.3 All beta proteins    Lipase/lipooxygenase domain (PLAT/LH2 domain)    Lipase/lipooxygenase domain (PLAT/LH2 domain)    Alpha-toxin, C-terminal domain    Alpha-toxin, C-terminal domain    Clostridium perfringens, different strains GO:  phospholipase C activity    zinc ion binding

Image Source: PDB

Loops in ArchDB95 clusters

1kho_A_304 - AR => SUBCLASS : 10.13.1
1kho_A_114 - HH => SUBCLASS : 1.1.3
1kho_A_114 - HH => SUBCLASS : 1.1.5
1kho_A_94 - HH => SUBCLASS : 2.2.1
1kho_A_174 - HH => SUBCLASS : 3.5.1
1kho_A_185 - HH => SUBCLASS : 5.12.2
1kho_A_10 - HH => SUBCLASS : 6.58.1
1kho_A_147 - HH => SUBCLASS : 11.6.1
1kho_A_340 - HA => SUBCLASS : 2.1.2
1kho_A_275 - HA => SUBCLASS : 3.1.2

Loops in ArchDB-EC clusters

1kho_A_174 - HH => SUBCLASS : 3.4.5

Loops not clustered in ArchDB

1kho_A_350 - AR
1kho_A_321 - AR
1kho_A_304 - AR
1kho_A_287 - AR
1kho_A_257 - AR
1kho_A_350 - AR
1kho_A_321 - AR
1kho_A_287 - AR
1kho_A_257 - AR
1kho_A_275 - HA
1kho_A_340 - HA
1kho_A_214 - HE
1kho_A_134 - HH
1kho_A_45 - HH
1kho_A_32 - HH

1ca1 - - percentage of sequence identity: 83
1gyg A - percentage of sequence identity: 83
1gyg B - percentage of sequence identity: 83
1kho A - percentage of sequence identity: 100
1kho B - percentage of sequence identity: 100
1olp A - percentage of sequence identity: 61
1olp B - percentage of sequence identity: 61
1olp C - percentage of sequence identity: 61
1olp D - percentage of sequence identity: 61
1qm6 A - percentage of sequence identity: 83
1qm6 B - percentage of sequence identity: 83
1qmd A - percentage of sequence identity: 83
1qmd B - percentage of sequence identity: 83