PDB: 1kkh Compound: mevalonate kinase Classification: TRANSFERASE Entry date in PDB: 2002-03-27 Resolution [Å]: 2.40 R-Factor: 0.200

CHAIN: A SWISS-PROT/TREMBL: Q58487    KEYWORD: 3D-structure    ATP-binding    Complete proteome    Kinase    Magnesium    Transferase    EC: 2.7.1.36 SCOP: d.14.1.5 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    GHMP Kinase, N-terminal domain    Mevalonate kinase    Archaeon Methanococcus jannaschii SCOP: d.58.26.3 Alpha and beta proteins (a+b)    Ferredoxin-like    GHMP Kinase, C-terminal domain    Mevalonate kinase    Mevalonate kinase    Archaeon Methanococcus jannaschii GO:  cytoplasm    ATP binding    kinase activity    mevalonate kinase activity    phosphotransferase activity, alcohol group as acceptor    biosynthesis    metabolism    phosphorylation

Image Source: PDB

Loops in ArchDB40 clusters

1kkh_A_182 - HE => SUBCLASS : 1.2.3
1kkh_A_182 - HE => SUBCLASS : 2.8.3
1kkh_A_182 - HE => SUBCLASS : 2.8.6
1kkh_A_79 - HE => SUBCLASS : 5.3.3
1kkh_A_169 - HA => SUBCLASS : 3.25.1
1kkh_A_48 - HA => SUBCLASS : 4.1.1
1kkh_A_285 - EH => SUBCLASS : 1.1.10
1kkh_A_285 - EH => SUBCLASS : 2.2.10
1kkh_A_193 - EH => SUBCLASS : 5.44.1
1kkh_A_100 - EH => SUBCLASS : 9.4.1
1kkh_A_205 - HH => SUBCLASS : 1.1.31
1kkh_A_218 - HH => SUBCLASS : 3.4.2
1kkh_A_238 - HH => SUBCLASS : 4.5.2
1kkh_A_116 - HH => SUBCLASS : 5.1.1
1kkh_A_116 - HH => SUBCLASS : 5.24.1

Loops in ArchDB95 clusters

1kkh_A_285 - EH => SUBCLASS : 1.1.10
1kkh_A_100 - EH => SUBCLASS : 9.10.1
1kkh_A_218 - HH => SUBCLASS : 3.3.2
1kkh_A_116 - HH => SUBCLASS : 5.1.1
1kkh_A_116 - HH => SUBCLASS : 5.8.1
1kkh_A_296 - HE => SUBCLASS : 2.6.7
1kkh_A_182 - HE => SUBCLASS : 2.7.1
1kkh_A_79 - HE => SUBCLASS : 5.3.3
1kkh_A_79 - HE => SUBCLASS : 8.4.1
1kkh_A_169 - HA => SUBCLASS : 3.18.1
1kkh_A_48 - HA => SUBCLASS : 4.1.1

Loops in ArchDB-EC clusters

1kkh_A_116 - HH => SUBCLASS : 5.1.1

Loops in ArchDB-KI clusters

1kkh_A_169 - HA => SUBCLASS : 4.6.1
1kkh_A_182 - HE => SUBCLASS : 2.5.1
1kkh_A_238 - HH => SUBCLASS : 4.1.2
1kkh_A_116 - HH => SUBCLASS : 5.1.2

Loops not clustered in ArchDB

1kkh_A_28 - AR
1kkh_A_28 - AR
1kkh_A_58 - EH
1kkh_A_177 - EH
1kkh_A_275 - HA
1kkh_A_169 - HA
1kkh_A_48 - HA
1kkh_A_6 - HA
1kkh_A_275 - HA
1kkh_A_6 - HA
1kkh_A_159 - HE
1kkh_A_260 - HE
1kkh_A_138 - HH

Loops not clustered in ArchDB-KI

1kkh_A_28 - AR
1kkh_A_285 - EH
1kkh_A_177 - EH
1kkh_A_100 - EH
1kkh_A_58 - EH
1kkh_A_193 - EH
1kkh_A_275 - HA
1kkh_A_6 - HA
1kkh_A_159 - HE
1kkh_A_296 - HE
1kkh_A_260 - HE
1kkh_A_79 - HE
1kkh_A_205 - HH
1kkh_A_138 - HH
1kkh_A_218 - HH

1vis A - percentage of sequence identity: 99