PDB: 1kn1 Compound: allophycocyanin Classification: ELECTRON TRANSPORT Entry date in PDB: 2002-12-18 Resolution [Å]: 2.20 R-Factor: 0.193

CHAIN: A SWISS-PROT/TREMBL: P59856    KEYWORD: 3D-structure    Bile pigment    Chloroplast    Electron transport    Photosynthesis    Phycobilisome    SCOP: a.1.1.3 All alpha proteins    Globin-like    Globin-like    Phycocyanin-like phycobilisome proteins    Allophycocyanin alpha subunit    Red algae (Porphyra yezoensis) GO:  light-harvesting complex (sensu Viridiplantae)    electron transport    photosynthesis    CHAIN: B SWISS-PROT/TREMBL: P59857    KEYWORD: 3D-structure    Bile pigment    Chloroplast    Electron transport    Methylation    Photosynthesis    Phycobilisome    SCOP: a.1.1.3 All alpha proteins    Globin-like    Globin-like    Phycocyanin-like phycobilisome proteins    Allophycocyanin beta subunit    Red algae (Porphyra yezoensis) GO:  light-harvesting complex (sensu Viridiplantae)    phycobilisome    electron transport    photosynthesis

Image Source: PDB

Loops in ArchDB95 clusters

1kn1_B_78 - HH => SUBCLASS : 2.5.1
1kn1_A_80 - HH => SUBCLASS : 2.5.2
1kn1_B_105 - HH => SUBCLASS : 2.9.1
1kn1_A_105 - HH => SUBCLASS : 2.11.2
1kn1_A_115 - HH => SUBCLASS : 3.1.1
1kn1_B_115 - HH => SUBCLASS : 3.1.4
1kn1_A_115 - HH => SUBCLASS : 3.4.9
1kn1_B_4 - HH => SUBCLASS : 5.7.2

Loops not clustered in ArchDB

1kn1_A_4 - HH
1kn1_A_21 - HH
1kn1_A_34 - HH
1kn1_A_48 - HH
1kn1_A_126 - HH
1kn1_B_21 - HH
1kn1_B_48 - HH
1kn1_B_126 - HH

1all A - percentage of sequence identity: 85
1all B - percentage of sequence identity: 92
1b33 B - percentage of sequence identity: 91
1b33 D - percentage of sequence identity: 91
1b33 F - percentage of sequence identity: 91
1b33 I - percentage of sequence identity: 91
1b33 K - percentage of sequence identity: 91
1b33 M - percentage of sequence identity: 91