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Information on 1knz
PDB: 1knz
Compound: nonstructural RNA-binding protein 34
Classification: VIRUS/VIRAL PROTEIN/RNA
Entry date in PDB: 2002-01-17
Resolution [Å]: 2.45
R-Factor: 0.228


CHAIN: A
SWISS-PROT/TREMBL: P03536
   KEYWORD: 3D-structure    Nonstructural protein    RNA-binding   
SCOP: e.34.1.1 Multi-domain proteins (alpha and beta)    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    Simian 11 rotavirus
GO:  RNA binding   


CHAIN: B
SWISS-PROT/TREMBL: P03536
   KEYWORD: 3D-structure    Nonstructural protein    RNA-binding   
SCOP: e.34.1.1 Multi-domain proteins (alpha and beta)    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    Simian 11 rotavirus
GO:  RNA binding   


CHAIN: C
SWISS-PROT/TREMBL: P03536
   KEYWORD: 3D-structure    Nonstructural protein    RNA-binding   
SCOP: e.34.1.1 Multi-domain proteins (alpha and beta)    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    Simian 11 rotavirus
GO:  RNA binding   


CHAIN: D
SWISS-PROT/TREMBL: P03536
   KEYWORD: 3D-structure    Nonstructural protein    RNA-binding   
SCOP: e.34.1.1 Multi-domain proteins (alpha and beta)    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    Simian 11 rotavirus
GO:  RNA binding   


CHAIN: I
SWISS-PROT/TREMBL: P03536
   KEYWORD: 3D-structure    Nonstructural protein    RNA-binding   
SCOP: e.34.1.1 Multi-domain proteins (alpha and beta)    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    Simian 11 rotavirus
GO:  RNA binding   


CHAIN: J
SWISS-PROT/TREMBL: P03536
   KEYWORD: 3D-structure    Nonstructural protein    RNA-binding   
SCOP: e.34.1.1 Multi-domain proteins (alpha and beta)    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    Simian 11 rotavirus
GO:  RNA binding   


CHAIN: M
SWISS-PROT/TREMBL: P03536
   KEYWORD: 3D-structure    Nonstructural protein    RNA-binding   
SCOP: e.34.1.1 Multi-domain proteins (alpha and beta)    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    Simian 11 rotavirus
GO:  RNA binding   


CHAIN: N
SWISS-PROT/TREMBL: P03536
   KEYWORD: 3D-structure    Nonstructural protein    RNA-binding   
SCOP: e.34.1.1 Multi-domain proteins (alpha and beta)    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    NSP3 homodimer    Simian 11 rotavirus
GO:  RNA binding   
1knz Image
Image Source: PDB

Stored Loops of 1knz

Loops in ArchDB40 clusters

1knz_A_125 - HA => SUBCLASS : 6.4.1
1knz_A_125 - HA => SUBCLASS : 7.1.1
1knz_A_136 - EH => SUBCLASS : 1.1.5
1knz_A_79 - HH => SUBCLASS : 1.1.53
1knz_A_39 - HH => SUBCLASS : 1.3.18
1knz_A_39 - HH => SUBCLASS : 1.3.19
1knz_A_61 - HH => SUBCLASS : 2.2.10
1knz_A_8 - HH => SUBCLASS : 5.1.1

Loops in ArchDB95 clusters

1knz_A_136 - EH => SUBCLASS : 1.1.3
1knz_A_79 - HH => SUBCLASS : 1.1.19
1knz_A_79 - HH => SUBCLASS : 1.1.32
1knz_A_39 - HH => SUBCLASS : 1.3.4
1knz_A_61 - HH => SUBCLASS : 2.2.9
1knz_A_8 - HH => SUBCLASS : 5.1.1
1knz_A_125 - HA => SUBCLASS : 6.5.1

Loops not clustered in ArchDB

1knz_A_114 - HE
1knz_A_93 - HH
1knz_A_141 - HH

Homologous structures to 1knz classified in ArchDB

1knz A - percentage of sequence identity: 100
1knz B - percentage of sequence identity: 100
1knz C - percentage of sequence identity: 100
1knz D - percentage of sequence identity: 100
1knz I - percentage of sequence identity: 100
1knz J - percentage of sequence identity: 100
1knz M - percentage of sequence identity: 100
1knz N - percentage of sequence identity: 100