PDB: 1kqr Compound: vp4 Classification: VIRUS/VIRAL PROTEIN Entry date in PDB: 2002-03-27 Resolution [Å]: 1.40 R-Factor: 0.169

CHAIN: A SWISS-PROT/TREMBL: P12473    KEYWORD: 3D-structure    Coat protein    Glycoprotein    SCOP: b.29.1.14 All beta proteins    Concanavalin A-like lectins/glucanases    Concanavalin A-like lectins/glucanases    vp4 sialic acid binding domain    vp4 sialic acid binding domain    Rhesus rotavirus GO:  viral capsid

Image Source: PDB

Loops in ArchDB40 clusters

1kqr_A_165 - HA => SUBCLASS : 2.1.1
1kqr_A_112 - HA => SUBCLASS : 2.1.5
1kqr_A_205 - EH => SUBCLASS : 1.1.46
1kqr_A_205 - EH => SUBCLASS : 1.3.1
1kqr_A_198 - AR => SUBCLASS : 1.1.2
1kqr_A_72 - AR => SUBCLASS : 5.10.1

Loops in ArchDB95 clusters

1kqr_A_205 - EH => SUBCLASS : 1.2.3
1kqr_A_198 - AR => SUBCLASS : 3.1.2
1kqr_A_72 - AR => SUBCLASS : 3.23.1
1kqr_A_153 - AR => SUBCLASS : 4.37.1
1kqr_A_72 - AR => SUBCLASS : 5.15.1
1kqr_A_165 - HA => SUBCLASS : 2.1.1
1kqr_A_112 - HA => SUBCLASS : 2.1.3
1kqr_A_165 - HA => SUBCLASS : 2.5.1

Loops not clustered in ArchDB

1kqr_A_66 - AR
1kqr_A_80 - AR
1kqr_A_102 - AR
1kqr_A_124 - AR
1kqr_A_185 - AR
1kqr_A_90 - HA
1kqr_A_138 - HA
1kqr_A_173 - HA

1kri A - percentage of sequence identity: 100