PDB: 1l3i Compound: precorrin-6y methyltransferasePUTATIVE decarboxyla Classification: TRANSFERASE, LYASE Entry date in PDB: 2002-11-27 Resolution [Å]: 1.95 R-Factor: 0.212

CHAIN: A SWISS-PROT/TREMBL: O26249    KEYWORD: Complete proteome    EC: 2.1.1.- SCOP: c.66.1.22 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    Precorrin-6Y methyltransferase (CbiT)    Precorrin-6Y methyltransferase (CbiT)    Archaeon Methanobacterium thermoautotrophicum GO:  molecular function unknown    S-adenosylmethionine-dependent methyltransferase activity    CHAIN: B SWISS-PROT/TREMBL: O26249    KEYWORD: Complete proteome    EC: 2.1.1.- SCOP: c.66.1.22 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    Precorrin-6Y methyltransferase (CbiT)    Precorrin-6Y methyltransferase (CbiT)    Archaeon Methanobacterium thermoautotrophicum GO:  molecular function unknown    S-adenosylmethionine-dependent methyltransferase activity    CHAIN: C SWISS-PROT/TREMBL: O26249    KEYWORD: Complete proteome    EC: 2.1.1.- SCOP: c.66.1.22 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    Precorrin-6Y methyltransferase (CbiT)    Precorrin-6Y methyltransferase (CbiT)    Archaeon Methanobacterium thermoautotrophicum GO:  molecular function unknown    S-adenosylmethionine-dependent methyltransferase activity    CHAIN: D SWISS-PROT/TREMBL: O26249    KEYWORD: Complete proteome    EC: 2.1.1.- SCOP: c.66.1.22 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    Precorrin-6Y methyltransferase (CbiT)    Precorrin-6Y methyltransferase (CbiT)    Archaeon Methanobacterium thermoautotrophicum GO:  molecular function unknown    S-adenosylmethionine-dependent methyltransferase activity    CHAIN: E SWISS-PROT/TREMBL: O26249    KEYWORD: Complete proteome    EC: 2.1.1.- SCOP: c.66.1.22 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    Precorrin-6Y methyltransferase (CbiT)    Precorrin-6Y methyltransferase (CbiT)    Archaeon Methanobacterium thermoautotrophicum GO:  molecular function unknown    S-adenosylmethionine-dependent methyltransferase activity    CHAIN: F SWISS-PROT/TREMBL: O26249    KEYWORD: Complete proteome    EC: 2.1.1.- SCOP: c.66.1.22 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    Precorrin-6Y methyltransferase (CbiT)    Precorrin-6Y methyltransferase (CbiT)    Archaeon Methanobacterium thermoautotrophicum GO:  molecular function unknown    S-adenosylmethionine-dependent methyltransferase activity

Image Source: PDB

Loops in ArchDB40 clusters

1l3i_A_46 - HE => SUBCLASS : 2.3.1
1l3i_A_146 - HE => SUBCLASS : 3.2.1
1l3i_A_146 - HE => SUBCLASS : 3.2.2
1l3i_A_124 - EH => SUBCLASS : 2.1.1
1l3i_A_57 - EH => SUBCLASS : 2.1.2

Loops in ArchDB95 clusters

1l3i_A_124 - EH => SUBCLASS : 2.1.2
1l3i_A_57 - EH => SUBCLASS : 2.1.3
1l3i_A_46 - HE => SUBCLASS : 2.2.8
1l3i_A_146 - HE => SUBCLASS : 3.5.1

Loops in ArchDB-EC clusters

1l3i_A_146 - HE => SUBCLASS : 3.5.1

Loops not clustered in ArchDB

1l3i_A_36 - EH
1l3i_A_84 - EH
1l3i_A_101 - EH
1l3i_A_155 - HA
1l3i_A_155 - HA
1l3i_A_65 - HE
1l3i_A_113 - HE
1l3i_A_21 - HE
1l3i_A_91 - HE
1l3i_A_137 - HH

1f38 A - percentage of sequence identity: 100
1f38 B - percentage of sequence identity: 100
1f38 C - percentage of sequence identity: 100
1f38 D - percentage of sequence identity: 100
1kxz A - percentage of sequence identity: 100
1kxz B - percentage of sequence identity: 100
1kxz C - percentage of sequence identity: 100
1kxz D - percentage of sequence identity: 100
1kxz E - percentage of sequence identity: 100
1kxz F - percentage of sequence identity: 100
1kxz G - percentage of sequence identity: 100
1kxz H - percentage of sequence identity: 100
1l3b A - percentage of sequence identity: 100
1l3b B - percentage of sequence identity: 100
1l3b C - percentage of sequence identity: 100
1l3b D - percentage of sequence identity: 100
1l3b E - percentage of sequence identity: 100
1l3b F - percentage of sequence identity: 100
1l3b G - percentage of sequence identity: 100
1l3b H - percentage of sequence identity: 100
1l3c A - percentage of sequence identity: 100
1l3c B - percentage of sequence identity: 100
1l3c C - percentage of sequence identity: 100
1l3c D - percentage of sequence identity: 100
1l3i A - percentage of sequence identity: 100
1l3i B - percentage of sequence identity: 100
1l3i C - percentage of sequence identity: 100
1l3i D - percentage of sequence identity: 100
1l3i E - percentage of sequence identity: 100
1l3i F - percentage of sequence identity: 100