PDB: 1l5o Compound: nicotinate-nucleotide--dimethylbenzimidazole phosp Classification: TRANSFERASE Entry date in PDB: 2002-09-07 Resolution [Å]: 1.60 R-Factor: 0.174

CHAIN: A SWISS-PROT/TREMBL: Q05603    KEYWORD: 3D-structure    Cobalamin biosynthesis    Complete proteome    Glycosyltransferase    Porphyrin biosynthesis    Transferase    EC: 2.4.2.21 SCOP: c.39.1.1 Alpha and beta proteins (a/b)    Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)    Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)    Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)    Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)    Salmonella typhimurium GO:  nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity    cobalamin biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1l5o_A_98 - HE => SUBCLASS : 1.1.1
1l5o_A_241 - HE => SUBCLASS : 2.1.1
1l5o_A_180 - HH => SUBCLASS : 3.1.1
1l5o_A_210 - HH => SUBCLASS : 6.5.1

Loops in ArchDB95 clusters

1l5o_A_180 - HH => SUBCLASS : 3.1.1
1l5o_A_210 - HH => SUBCLASS : 6.11.1
1l5o_A_98 - HE => SUBCLASS : 1.1.1
1l5o_A_241 - HE => SUBCLASS : 2.1.1

Loops in ArchDB-EC clusters

1l5o_A_210 - HH => SUBCLASS : 6.8.1

Loops not clustered in ArchDB

1l5o_A_60 - EH
1l5o_A_126 - EH
1l5o_A_167 - EH
1l5o_A_260 - EH
1l5o_A_285 - EH
1l5o_A_109 - HA
1l5o_A_109 - HA
1l5o_A_265 - HE
1l5o_A_145 - HE
1l5o_A_37 - HE
1l5o_A_16 - HH
1l5o_A_84 - HH
1l5o_A_195 - HH
1l5o_A_231 - HH
1l5o_A_296 - HH
1l5o_A_5 - HH

1d0s A - percentage of sequence identity: 99
1d0v A - percentage of sequence identity: 99
1jh8 A - percentage of sequence identity: 100
1jha A - percentage of sequence identity: 100
1jhm A - percentage of sequence identity: 100
1jho A - percentage of sequence identity: 100
1jhp A - percentage of sequence identity: 100
1jhq A - percentage of sequence identity: 100
1jhr A - percentage of sequence identity: 100
1jhu A - percentage of sequence identity: 100
1jhv A - percentage of sequence identity: 100
1jhx A - percentage of sequence identity: 100
1jhy A - percentage of sequence identity: 100
1l4b A - percentage of sequence identity: 100
1l4e A - percentage of sequence identity: 100
1l4f A - percentage of sequence identity: 100
1l4g A - percentage of sequence identity: 100
1l4h A - percentage of sequence identity: 100
1l4k A - percentage of sequence identity: 100
1l4l A - percentage of sequence identity: 100
1l4m A - percentage of sequence identity: 100
1l4n A - percentage of sequence identity: 100
1l5f A - percentage of sequence identity: 100
1l5k A - percentage of sequence identity: 100
1l5l A - percentage of sequence identity: 100
1l5m A - percentage of sequence identity: 100
1l5n A - percentage of sequence identity: 100