ArchDB - Biological DataBase of Protein Loops

Information on 1ld9

PDB: 1ld9
Compound: mhc class i h-2ld heavy chain
Classification: MAJOR HISTOCOMPATIBILITY COMPLEX
Entry date in PDB: 1998-05-06
Resolution [Å]: 2.40
R-Factor: 0.186

CHAIN: A

SWISS-PROT/TREMBL: P01897
   KEYWORD: 3D-structure    Glycoprotein    MHC I    Signal    Transmembrane
SCOP: b.1.1.2 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    C1 set domains (antibody constant domain-like)    Class I MHC, alpha-3 domain    Mouse (Mus musculus)
SCOP: d.19.1.1 Alpha and beta proteins (a+b)    MHC antigen-recognition domain    MHC antigen-recognition domain    MHC antigen-recognition domain    Class I MHC, alpha-1 and alpha-2 domains    Mouse (Mus musculus), H-2LD
GO:  MHC class I protein complex    MHC class I receptor activity    antigen presentation

CHAIN: B

SWISS-PROT/TREMBL: P01887
   KEYWORD: 3D-structure    Immunoglobulin domain    MHC I    Polymorphism    Signal
SCOP: b.1.1.2 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    C1 set domains (antibody constant domain-like)    beta2-microglobulin    Mouse (Mus musculus)
GO:

CHAIN: D

CHAIN: E

Image Source: PDB

Stored Loops of 1ld9

Loops in ArchDB95 clusters

1ld9_A_132 - EH => SUBCLASS : 2.1.2
1ld9_A_45 - EH => SUBCLASS : 9.2.1
1ld9_A_140 - HH => SUBCLASS : 1.3.4
1ld9_A_58 - HE => SUBCLASS : 6.5.1

Loops not clustered in ArchDB

1ld9_A_244 - AR
1ld9_A_214 - AR
1ld9_A_199 - AR
1ld9_A_6 - HA
1ld9_A_191 - HA
1ld9_A_121 - HA
1ld9_A_111 - HA
1ld9_A_94 - HA
1ld9_A_31 - HA
1ld9_A_21 - HA
1ld9_A_177 - HE
1ld9_A_153 - HH
1ld9_A_163 - HH

Homologous structures to 1ld9 classified in ArchDB

1a1m A - percentage of sequence identity: 72
1a1n A - percentage of sequence identity: 72
1a1o A - percentage of sequence identity: 72
1a9b A - percentage of sequence identity: 72
1a9b D - percentage of sequence identity: 72
1a9e A - percentage of sequence identity: 72
1agb A - percentage of sequence identity: 73
1agc A - percentage of sequence identity: 73
1agd A - percentage of sequence identity: 73
1age A - percentage of sequence identity: 73
1agf A - percentage of sequence identity: 73
1akj A - percentage of sequence identity: 70
1ao7 A - percentage of sequence identity: 70
1b0g A - percentage of sequence identity: 70
1b0g D - percentage of sequence identity: 70
1b0r A - percentage of sequence identity: 70
1bd2 A - percentage of sequence identity: 70
1bii A - percentage of sequence identity: 87
1bmg - - percentage of sequence identity: 67
1bqh A - percentage of sequence identity: 85
1bqh D - percentage of sequence identity: 85
1bz9 A - percentage of sequence identity: 93
1ce6 A - percentage of sequence identity: 93
1cg9 A - percentage of sequence identity: 72
1ddh A - percentage of sequence identity: 86
1duy A - percentage of sequence identity: 70
1duy D - percentage of sequence identity: 70
1duz A - percentage of sequence identity: 70
1duz D - percentage of sequence identity: 70
1e27 A - percentage of sequence identity: 72
1e28 A - percentage of sequence identity: 72
1ed3 A - percentage of sequence identity: 80
1ed3 D - percentage of sequence identity: 80
1eey A - percentage of sequence identity: 70
1eey D - percentage of sequence identity: 70
1eez A - percentage of sequence identity: 70
1eez D - percentage of sequence identity: 70
1efx A - percentage of sequence identity: 74
1ffn A - percentage of sequence identity: 93
1ffn D - percentage of sequence identity: 93
1ffo A - percentage of sequence identity: 93
1ffo D - percentage of sequence identity: 93
1ffp A - percentage of sequence identity: 93
1ffp D - percentage of sequence identity: 93
1fg2 A - percentage of sequence identity: 93
1fg2 D - percentage of sequence identity: 93
1fg2 G - percentage of sequence identity: 93
1fg2 J - percentage of sequence identity: 93
1fo0 H - percentage of sequence identity: 85
1fzj A - percentage of sequence identity: 86
1fzk A - percentage of sequence identity: 86
1fzm A - percentage of sequence identity: 86
1fzo A - percentage of sequence identity: 86
1g6r H - percentage of sequence identity: 85
1g6r I - percentage of sequence identity: 85
1g7p A - percentage of sequence identity: 85
1g7q A - percentage of sequence identity: 85
1hhg A - percentage of sequence identity: 70
1hhg D - percentage of sequence identity: 70
1hhh A - percentage of sequence identity: 70
1hhi A - percentage of sequence identity: 70
1hhi D - percentage of sequence identity: 70
1hhj A - percentage of sequence identity: 70
1hhj D - percentage of sequence identity: 70
1hhk A - percentage of sequence identity: 70
1hhk D - percentage of sequence identity: 70
1hla A - percentage of sequence identity: 70
1hoc A - percentage of sequence identity: 93
1hsa A - percentage of sequence identity: 74
1hsa D - percentage of sequence identity: 74
1hsb A - percentage of sequence identity: 71
1i1f A - percentage of sequence identity: 70
1i1f D - percentage of sequence identity: 70
1i1y A - percentage of sequence identity: 70
1i1y D - percentage of sequence identity: 70
1i4f A - percentage of sequence identity: 70
1i7r A - percentage of sequence identity: 70
1i7r D - percentage of sequence identity: 70
1i7t A - percentage of sequence identity: 70
1i7t D - percentage of sequence identity: 70
1i7u A - percentage of sequence identity: 70
1i7u D - percentage of sequence identity: 70
1im3 A - percentage of sequence identity: 70
1im3 E - percentage of sequence identity: 70
1im3 I - percentage of sequence identity: 70
1im3 M - percentage of sequence identity: 70
1im9 A - percentage of sequence identity: 73
1im9 E - percentage of sequence identity: 73
1inq A - percentage of sequence identity: 93
1jf1 A - percentage of sequence identity: 70
1jgd A - percentage of sequence identity: 74
1jge A - percentage of sequence identity: 74
1jht A - percentage of sequence identity: 70
1jpf A - percentage of sequence identity: 93
1jpg A - percentage of sequence identity: 93
1juf A - percentage of sequence identity: 93
1k5n A - percentage of sequence identity: 74
1k8d A - percentage of sequence identity: 83
1kbg H - percentage of sequence identity: 85
1kj2 H - percentage of sequence identity: 85
1kj2 I - percentage of sequence identity: 85
1kj3 H - percentage of sequence identity: 85
1kj3 I - percentage of sequence identity: 85
1kjm A - percentage of sequence identity: 80
1kjv A - percentage of sequence identity: 80
1kpr A - percentage of sequence identity: 70
1kpr C - percentage of sequence identity: 70
1kpu A - percentage of sequence identity: 85
1kpv A - percentage of sequence identity: 85
1ktl A - percentage of sequence identity: 70
1ktl C - percentage of sequence identity: 70
1ld9 A - percentage of sequence identity: 100
1ld9 D - percentage of sequence identity: 100
1ldp H - percentage of sequence identity: 100
1leg A - percentage of sequence identity: 85
1lek A - percentage of sequence identity: 85
1lk2 A - percentage of sequence identity: 85
1lp9 A - percentage of sequence identity: 70
1lp9 H - percentage of sequence identity: 70
1m05 A - percentage of sequence identity: 73
1m05 C - percentage of sequence identity: 73
1m6o A - percentage of sequence identity: 73
1mhc A - percentage of sequence identity: 68
1mhc D - percentage of sequence identity: 68
1mhe A - percentage of sequence identity: 69
1mhe C - percentage of sequence identity: 69
1mi5 A - percentage of sequence identity: 73
1mwa H - percentage of sequence identity: 85
1mwa I - percentage of sequence identity: 85
1n2r A - percentage of sequence identity: 73
1n3n A - percentage of sequence identity: 93
1n3n C - percentage of sequence identity: 93
1n3n E - percentage of sequence identity: 93
1n3n G - percentage of sequence identity: 93
1n59 A - percentage of sequence identity: 85
1n59 C - percentage of sequence identity: 85
1n5a A - percentage of sequence identity: 93
1n5a D - percentage of sequence identity: 93
1n5a G - percentage of sequence identity: 93
1n5a J - percentage of sequence identity: 93
1nam H - percentage of sequence identity: 85
1nan H - percentage of sequence identity: 85
1nan L - percentage of sequence identity: 85
1nez A - percentage of sequence identity: 68
1of2 A - percentage of sequence identity: 74
1oga A - percentage of sequence identity: 70
1ogt A - percentage of sequence identity: 74
1osz A - percentage of sequence identity: 85
1p1z A - percentage of sequence identity: 85
1p4l A - percentage of sequence identity: 85
1p7q A - percentage of sequence identity: 70
1q94 A - percentage of sequence identity: 73
1q94 D - percentage of sequence identity: 73
1qew A - percentage of sequence identity: 70
1qlf A - percentage of sequence identity: 93
1qo3 A - percentage of sequence identity: 87
1qqd A - percentage of sequence identity: 74
1qr1 A - percentage of sequence identity: 70
1qr1 D - percentage of sequence identity: 70
1qrn A - percentage of sequence identity: 70
1qse A - percentage of sequence identity: 70
1qsf A - percentage of sequence identity: 70
1qvo A - percentage of sequence identity: 73
1qvo D - percentage of sequence identity: 73
1rjy A - percentage of sequence identity: 86
1rjy D - percentage of sequence identity: 86
1rjz A - percentage of sequence identity: 86
1rjz D - percentage of sequence identity: 86
1rk0 A - percentage of sequence identity: 85
1rk1 A - percentage of sequence identity: 85
1s7q A - percentage of sequence identity: 85
1s7r A - percentage of sequence identity: 85
1s7r D - percentage of sequence identity: 85
1s7s A - percentage of sequence identity: 85
1s7t A - percentage of sequence identity: 85
1s7t D - percentage of sequence identity: 85
1s7u A - percentage of sequence identity: 93
1s7u D - percentage of sequence identity: 93
1s7u G - percentage of sequence identity: 93
1s7u J - percentage of sequence identity: 93
1s7v A - percentage of sequence identity: 93
1s7v D - percentage of sequence identity: 93
1s7w A - percentage of sequence identity: 93
1s7w D - percentage of sequence identity: 93
1s7w G - percentage of sequence identity: 93
1s7w J - percentage of sequence identity: 93
1s7x A - percentage of sequence identity: 93
1s7x D - percentage of sequence identity: 93
1s7x G - percentage of sequence identity: 93
1s7x J - percentage of sequence identity: 93
1s8d A - percentage of sequence identity: 70
1s9w A - percentage of sequence identity: 70
1s9x A - percentage of sequence identity: 70
1s9y A - percentage of sequence identity: 70
1sys A - percentage of sequence identity: 73
1syv A - percentage of sequence identity: 73
1t0m A - percentage of sequence identity: 85
1t0m D - percentage of sequence identity: 85
1t0n A - percentage of sequence identity: 86
1t0n D - percentage of sequence identity: 86
1t1w A - percentage of sequence identity: 70
1t1x A - percentage of sequence identity: 70
1t1y A - percentage of sequence identity: 70
1t1z A - percentage of sequence identity: 70
1t20 A - percentage of sequence identity: 70
1t21 A - percentage of sequence identity: 70
1t22 A - percentage of sequence identity: 70
1tmc A - percentage of sequence identity: 71
1tvb A - percentage of sequence identity: 70
1tvb D - percentage of sequence identity: 70
1tvh A - percentage of sequence identity: 70
1tvh D - percentage of sequence identity: 70
1uxs A - percentage of sequence identity: 74
1uxw A - percentage of sequence identity: 74
1vac A - percentage of sequence identity: 85
1vad A - percentage of sequence identity: 85
1vgk A - percentage of sequence identity: 83
1w0v A - percentage of sequence identity: 74
1w0w A - percentage of sequence identity: 74
1w72 A - percentage of sequence identity: 71
1w72 D - percentage of sequence identity: 71
1wbx A - percentage of sequence identity: 93
1wby A - percentage of sequence identity: 93
1wbz A - percentage of sequence identity: 85
1wbz C - percentage of sequence identity: 85
1x7q A - percentage of sequence identity: 73
1xh3 A - percentage of sequence identity: 72
1xr8 A - percentage of sequence identity: 73
1xr9 A - percentage of sequence identity: 73
1ydp A - percentage of sequence identity: 71
1yn6 A - percentage of sequence identity: 93
1yn7 A - percentage of sequence identity: 93
1zhb A - percentage of sequence identity: 93
1zhb D - percentage of sequence identity: 93
1zhb G - percentage of sequence identity: 93
1zhb J - percentage of sequence identity: 93
1zhk A - percentage of sequence identity: 72
1zhl A - percentage of sequence identity: 72
1zsd A - percentage of sequence identity: 72
1zt1 A - percentage of sequence identity: 83
1zt7 A - percentage of sequence identity: 83
1zt7 C - percentage of sequence identity: 83
2a83 A - percentage of sequence identity: 74
2ak4 A - percentage of sequence identity: 72
2ak4 F - percentage of sequence identity: 72
2ak4 K - percentage of sequence identity: 72
2ak4 Q - percentage of sequence identity: 72
2av1 A - percentage of sequence identity: 70
2av1 D - percentage of sequence identity: 70
2av7 A - percentage of sequence identity: 70
2av7 D - percentage of sequence identity: 70
2axf A - percentage of sequence identity: 72
2axg A - percentage of sequence identity: 72
2bck A - percentage of sequence identity: 71
2bck D - percentage of sequence identity: 71
2bnq A - percentage of sequence identity: 70
2bnr A - percentage of sequence identity: 70
2bsr A - percentage of sequence identity: 74
2bss A - percentage of sequence identity: 74
2bst A - percentage of sequence identity: 74
2bsu A - percentage of sequence identity: 70
2bsu D - percentage of sequence identity: 70
2bsv A - percentage of sequence identity: 70
2bsv D - percentage of sequence identity: 70
2bvo A - percentage of sequence identity: 71
2bvp A - percentage of sequence identity: 71
2bvq A - percentage of sequence identity: 71
2ckb H - percentage of sequence identity: 85
2ckb I - percentage of sequence identity: 85
2clr A - percentage of sequence identity: 70
2clr D - percentage of sequence identity: 70
2f74 A - percentage of sequence identity: 93
2f74 D - percentage of sequence identity: 93
2fwo A - percentage of sequence identity: 83
2hla A - percentage of sequence identity: 71
2mha A - percentage of sequence identity: 85
2mha C - percentage of sequence identity: 85
2vaa A - percentage of sequence identity: 85
2vab A - percentage of sequence identity: 85
3hla A - percentage of sequence identity: 70