PDB: 1lla Compound: Hemocyanin (subunit type ii) Classification: OXYGEN TRANSPORT Entry date in PDB: 1994-01-31 Resolution [Å]: 2.20 R-Factor: 0.174

CHAIN: - SWISS-PROT/TREMBL: P04253    KEYWORD: 3D-structure    Copper    Glycoprotein    Hemolymph    Oxygen transport    Transport    SCOP: a.85.1.1 All alpha proteins    Hemocyanin, N-terminal domain    Hemocyanin, N-terminal domain    Hemocyanin, N-terminal domain    Hemocyanin, N-terminal domain    Horseshoe crab (Limulus polyphemus) SCOP: a.86.1.1 All alpha proteins    Di-copper centre-containing domain    Di-copper centre-containing domain    Hemocyanin middle domain    Arthropod hemocyanin    Horseshoe crab (Limulus polyphemus) SCOP: b.1.18.3 All beta proteins    Immunoglobulin-like beta-sandwich    E set domains    Arthropod hemocyanin, C-terminal domain    Arthropod hemocyanin, C-terminal domain    Horseshoe crab (Limulus polyphemus) GO:  oxidoreductase activity    oxygen transporter activity    metabolism    transport

Image Source: PDB

Loops in ArchDB40 clusters

1lla_*_266 - HE => SUBCLASS : 1.1.6
1lla_*_266 - HE => SUBCLASS : 1.1.9
1lla_*_476 - HE => SUBCLASS : 1.2.16
1lla_*_284 - HA => SUBCLASS : 3.1.1
1lla_*_241 - HA => SUBCLASS : 4.1.1
1lla_*_292 - EH => SUBCLASS : 1.1.7
1lla_*_51 - HH => SUBCLASS : 3.4.4

Loops in ArchDB95 clusters

1lla_*_292 - EH => SUBCLASS : 0.1.22
1lla_*_292 - EH => SUBCLASS : 2.4.10
1lla_*_70 - HH => SUBCLASS : 2.1.10
1lla_*_51 - HH => SUBCLASS : 3.5.1
1lla_*_358 - HH => SUBCLASS : 5.16.1
1lla_*_266 - HE => SUBCLASS : 1.2.5
1lla_*_266 - HE => SUBCLASS : 1.2.6
1lla_*_284 - HA => SUBCLASS : 3.1.1
1lla_*_241 - HA => SUBCLASS : 4.1.1

Loops not clustered in ArchDB

1lla_*_391 - AR
1lla_*_429 - AR
1lla_*_442 - AR
1lla_*_484 - AR
1lla_*_496 - AR
1lla_*_538 - AR
1lla_*_552 - EH
1lla_*_510 - EH
1lla_*_455 - EH
1lla_*_247 - EH
1lla_*_143 - EH
1lla_*_405 - HA
1lla_*_580 - HE
1lla_*_517 - HE
1lla_*_383 - HE
1lla_*_196 - HE
1lla_*_122 - HE
1lla_*_323 - HH
1lla_*_317 - HH
1lla_*_300 - HH
1lla_*_186 - HH
1lla_*_167 - HH
1lla_*_161 - HH
1lla_*_111 - HH
1lla_*_86 - HH
1lla_*_3 - HH
1lla_*_563 - HH

1ll1 - - percentage of sequence identity: 99
1nol - - percentage of sequence identity: 100
1oxy - - percentage of sequence identity: 99