ArchDB - Biological DataBase of Protein Loops

Information on 1llm

PDB: 1llm
Compound: 5'-d(TpCpCpCpApCpGpCpGpTpGpGpG)-3'
Classification: TRANSCRIPTION/DNA
Entry date in PDB: 2003-09-30
Resolution [Å]: 1.50
R-Factor: 0.216

CHAIN: C

SWISS-PROT/TREMBL: P08046
   KEYWORD: 3D-structure    Activator    DNA-binding    Metal-binding    Nuclear protein    Repeat    Transcription regulation    Zinc-finger    3D-structure    Activator    DNA-binding    Metal-binding    Nuclear protein    Repeat    Transcription regulation    Zinc-finger    3D-structure    Activator    Amino-acid biosynthesis    DNA-binding    Nuclear protein    Transcription regulation
SCOP: g.37.1.1 Small proteins    C2H2 and C2HC zinc fingers    C2H2 and C2HC zinc fingers    Classic zinc finger, C2H2    ZIF268    Mouse (Mus musculus)
SCOP: g.37.1.1 Small proteins    C2H2 and C2HC zinc fingers    C2H2 and C2HC zinc fingers    Classic zinc finger, C2H2    ZIF268    Mouse (Mus musculus)
GO:  nucleus    nucleus    DNA binding    nucleic acid binding    zinc ion binding    regulation of transcription, DNA-dependent

CHAIN: D

Image Source: PDB

Stored Loops of 1llm

Loops in ArchDB95 clusters

1llm_C_112 - EH => SUBCLASS : 2.1.1
1llm_C_116 - HE => SUBCLASS : 4.21.1
1llm_C_104 - HA => SUBCLASS : 4.1.1
1llm_C_132 - HA => SUBCLASS : 4.1.1

Loops not clustered in ArchDB

1llm_C_140 - EH
1llm_C_144 - HH

Homologous structures to 1llm classified in ArchDB

1a1h A - percentage of sequence identity: 94
1a1i A - percentage of sequence identity: 94
1aay A - percentage of sequence identity: 94
1ce9 A - percentage of sequence identity: 100
1ce9 B - percentage of sequence identity: 100
1ce9 C - percentage of sequence identity: 100
1ce9 D - percentage of sequence identity: 100
1dgc A - percentage of sequence identity: 63
1ebo A - percentage of sequence identity: 71
1ebo B - percentage of sequence identity: 71
1ebo C - percentage of sequence identity: 71
1ebo D - percentage of sequence identity: 71
1ebo E - percentage of sequence identity: 71
1ebo F - percentage of sequence identity: 71
1env A - percentage of sequence identity: 71
1f2i G - percentage of sequence identity: 100
1f2i H - percentage of sequence identity: 100
1f2i I - percentage of sequence identity: 100
1f2i J - percentage of sequence identity: 100
1f2i K - percentage of sequence identity: 100
1f2i L - percentage of sequence identity: 100
1fav A - percentage of sequence identity: 71
1gcm A - percentage of sequence identity: 72
1gcm B - percentage of sequence identity: 72
1gcm C - percentage of sequence identity: 72
1gk6 A - percentage of sequence identity: 96
1gk6 B - percentage of sequence identity: 96
1ij0 A - percentage of sequence identity: 93
1ij0 B - percentage of sequence identity: 93
1ij0 C - percentage of sequence identity: 93
1ij1 A - percentage of sequence identity: 93
1ij1 B - percentage of sequence identity: 93
1ij1 C - percentage of sequence identity: 93
1ij2 A - percentage of sequence identity: 96
1ij2 B - percentage of sequence identity: 96
1ij2 C - percentage of sequence identity: 96
1ij3 A - percentage of sequence identity: 96
1ij3 B - percentage of sequence identity: 96
1ij3 C - percentage of sequence identity: 96
1kql A - percentage of sequence identity: 92
1kql B - percentage of sequence identity: 92
1ld4 E - percentage of sequence identity: 78
1ld4 F - percentage of sequence identity: 78
1ld4 G - percentage of sequence identity: 78
1ld4 H - percentage of sequence identity: 78
1ld4 I - percentage of sequence identity: 78
1ld4 J - percentage of sequence identity: 78
1ld4 K - percentage of sequence identity: 78
1ld4 L - percentage of sequence identity: 78
1llm C - percentage of sequence identity: 100
1llm D - percentage of sequence identity: 100
1nkn A - percentage of sequence identity: 100
1nkn B - percentage of sequence identity: 100
1nkn C - percentage of sequence identity: 100
1nkn D - percentage of sequence identity: 100
1rb1 A - percentage of sequence identity: 96
1rb1 B - percentage of sequence identity: 96
1rb1 C - percentage of sequence identity: 96
1rb4 A - percentage of sequence identity: 96
1rb4 B - percentage of sequence identity: 96
1rb4 C - percentage of sequence identity: 96
1rb5 A - percentage of sequence identity: 96
1rb5 B - percentage of sequence identity: 96
1rb5 C - percentage of sequence identity: 96
1rb6 A - percentage of sequence identity: 96
1rb6 B - percentage of sequence identity: 96
1rb6 C - percentage of sequence identity: 96
1swi A - percentage of sequence identity: 96
1swi B - percentage of sequence identity: 96
1swi C - percentage of sequence identity: 96
1xf7 A - percentage of sequence identity: 79
1ysa C - percentage of sequence identity: 78
1ysa D - percentage of sequence identity: 78
1zii A - percentage of sequence identity: 96
1zii B - percentage of sequence identity: 96
1zij A - percentage of sequence identity: 96
1zij B - percentage of sequence identity: 96
1zij C - percentage of sequence identity: 96
1zik A - percentage of sequence identity: 96
1zik B - percentage of sequence identity: 96
1zil A - percentage of sequence identity: 96
1zil B - percentage of sequence identity: 96
1zim A - percentage of sequence identity: 96
1zim B - percentage of sequence identity: 96
1zim C - percentage of sequence identity: 96
1zta - - percentage of sequence identity: 100
2b1f A - percentage of sequence identity: 89
2b1f B - percentage of sequence identity: 89
2b1f C - percentage of sequence identity: 89
2b1f D - percentage of sequence identity: 89
2b22 A - percentage of sequence identity: 89
2b9c A - percentage of sequence identity: 78
2b9c B - percentage of sequence identity: 78
2dgc A - percentage of sequence identity: 63
2zta A - percentage of sequence identity: 100
2zta B - percentage of sequence identity: 100