PDB: 1lm4 Compound: peptide deformylase pdf1 Classification: HYDROLASE Entry date in PDB: 2003-06-24 Resolution [Å]: 1.45 R-Factor: 0.170

CHAIN: A SWISS-PROT/TREMBL: Q9F4L4    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Iron    Protein biosynthesis    EC: 3.5.1.88 SCOP: d.167.1.1 Alpha and beta proteins (a+b)    Peptide deformylase    Peptide deformylase    Peptide deformylase    Peptide deformylase    Sthaphylococcus aureus GO:  iron ion binding    peptide deformylase activity    protein biosynthesis    CHAIN: B SWISS-PROT/TREMBL: Q9F4L4    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Iron    Protein biosynthesis    EC: 3.5.1.88 SCOP: d.167.1.1 Alpha and beta proteins (a+b)    Peptide deformylase    Peptide deformylase    Peptide deformylase    Peptide deformylase    Sthaphylococcus aureus GO:  iron ion binding    peptide deformylase activity    protein biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1lm4_A_127 - HA => SUBCLASS : 3.1.1
1lm4_A_60 - HA => SUBCLASS : 9.4.1
1lm4_A_139 - EH => SUBCLASS : 0.1.59
1lm4_A_28 - HH => SUBCLASS : 1.1.2
1lm4_A_28 - HH => SUBCLASS : 1.1.3

Loops in ArchDB95 clusters

1lm4_A_139 - EH => SUBCLASS : 0.1.63
1lm4_A_28 - HH => SUBCLASS : 1.1.1
1lm4_A_28 - HH => SUBCLASS : 1.1.8
1lm4_A_47 - HE => SUBCLASS : 6.57.1
1lm4_A_127 - HA => SUBCLASS : 3.1.1
1lm4_A_60 - HA => SUBCLASS : 9.7.1

Loops in ArchDB-EC clusters

1lm4_A_28 - HH => SUBCLASS : 1.1.1

Loops not clustered in ArchDB

1lm4_A_124 - AR
1lm4_A_86 - AR
1lm4_A_124 - AR
1lm4_A_86 - AR
1lm4_A_127 - HA
1lm4_A_102 - HA
1lm4_A_72 - HA
1lm4_A_60 - HA
1lm4_A_102 - HA
1lm4_A_72 - HA
1lm4_A_146 - HE

1lm4 A - percentage of sequence identity: 100
1lm4 B - percentage of sequence identity: 100
1lmh A - percentage of sequence identity: 98
1lqw A - percentage of sequence identity: 100
1lqw B - percentage of sequence identity: 100
1q1y A - percentage of sequence identity: 99
2ai9 A - percentage of sequence identity: 100
2ai9 B - percentage of sequence identity: 100