PDB: 1lp8 Compound: dianthin 30 Classification: ANTIVIRAL PROTEIN Entry date in PDB: 2004-05-11 Resolution [Å]: 1.65 R-Factor: 0.180

CHAIN: A SWISS-PROT/TREMBL: P24476    KEYWORD: Antiviral    Hydrolase    Plant defense    Protein synthesis inhibitor    Signal    Toxin    EC: 3.2.2.22 SCOP: d.165.1.1 Alpha and beta proteins (a+b)    Ribosome inactivating proteins (RIP)    Ribosome inactivating proteins (RIP)    Plant cytotoxins    Dianthin 30    Clove pink (Dianthus caryophyllus) GO:  rRNA N-glycosylase activity    negative regulation of protein biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1lp8_A_209 - HE => SUBCLASS : 0.1.3
1lp8_A_209 - HE => SUBCLASS : 0.1.7
1lp8_A_220 - HA => SUBCLASS : 2.4.2
1lp8_A_74 - HA => SUBCLASS : 3.1.1
1lp8_A_61 - HA => SUBCLASS : 4.1.2
1lp8_A_224 - HA => SUBCLASS : 4.33.1
1lp8_A_112 - EH => SUBCLASS : 6.17.1
1lp8_A_3 - EH => SUBCLASS : 6.26.1
1lp8_A_176 - HH => SUBCLASS : 1.2.1
1lp8_A_176 - HH => SUBCLASS : 1.2.2

Loops in ArchDB95 clusters

1lp8_A_112 - EH => SUBCLASS : 3.21.1
1lp8_A_3 - EH => SUBCLASS : 5.61.1
1lp8_A_112 - EH => SUBCLASS : 6.36.1
1lp8_A_86 - EH => SUBCLASS : 6.73.1
1lp8_A_176 - HH => SUBCLASS : 1.2.1
1lp8_A_144 - HH => SUBCLASS : 6.45.1
1lp8_A_209 - HE => SUBCLASS : 0.1.2
1lp8_A_209 - HE => SUBCLASS : 0.1.77
1lp8_A_220 - HA => SUBCLASS : 2.5.1
1lp8_A_74 - HA => SUBCLASS : 3.1.1
1lp8_A_224 - HA => SUBCLASS : 4.14.1
1lp8_A_61 - HA => SUBCLASS : 5.5.1

Loops not clustered in ArchDB

1lp8_A_40 - AR
1lp8_A_235 - AR
1lp8_A_51 - HA
1lp8_A_13 - HE
1lp8_A_97 - HE
1lp8_A_121 - HH
1lp8_A_161 - HH
1lp8_A_182 - HH
1lp8_A_200 - HH

1lpc A - percentage of sequence identity: 100
1lpd A - percentage of sequence identity: 100
1rl0 A - percentage of sequence identity: 99