PDB: 1lsh Compound: lipovitellin (lv-1n, lv-1c) Classification: LIPID BINDING PROTEIN Entry date in PDB: 2002-07-31 Resolution [Å]: 1.90 R-Factor: 0.193

CHAIN: A SWISS-PROT/TREMBL: Q91062    KEYWORD: 3D-structure    Glycoprotein    Phosphorylation    Signal    Storage protein    SCOP: a.118.4.1 All alpha proteins    alpha-alpha superhelix    Lipovitellin-phosvitin complex, superhelical domain    Lipovitellin-phosvitin complex, superhelical domain    Lipovitellin-phosvitin complex, superhelical domain    Lamprey (Ichthyomyzon unicuspis) SCOP: f.7.1.1 Membrane and cell surface proteins and peptides    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lamprey (Ichthyomyzon unicuspis) SCOP: f.7.1.1 Membrane and cell surface proteins and peptides    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lamprey (Ichthyomyzon unicuspis) GO:  lipid transporter activity    lipid transport    CHAIN: B SWISS-PROT/TREMBL: Q91062    KEYWORD: 3D-structure    Glycoprotein    Phosphorylation    Signal    Storage protein    SCOP: f.7.1.1 Membrane and cell surface proteins and peptides    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lipovitellin-phosvitin complex; beta-sheet shell regions    Lamprey (Ichthyomyzon unicuspis) GO:  lipid transporter activity    lipid transport

Image Source: PDB

Loops in ArchDB40 clusters

1lsh_B_1473 - HE => SUBCLASS : 1.1.1
1lsh_B_1473 - HE => SUBCLASS : 1.1.13
1lsh_B_1473 - HE => SUBCLASS : 2.1.2
1lsh_B_1385 - HE => SUBCLASS : 3.25.1
1lsh_B_1494 - HA => SUBCLASS : 2.2.1
1lsh_B_1506 - HA => SUBCLASS : 2.2.1
1lsh_B_1406 - HA => SUBCLASS : 4.12.1
1lsh_B_1391 - HA => SUBCLASS : 9.3.1

Loops in ArchDB95 clusters

1lsh_B_1385 - HE => SUBCLASS : 2.1.1
1lsh_B_1473 - HE => SUBCLASS : 2.1.1
1lsh_B_1473 - HE => SUBCLASS : 2.1.12
1lsh_B_1494 - HA => SUBCLASS : 2.2.1
1lsh_B_1506 - HA => SUBCLASS : 2.2.1
1lsh_B_1506 - HA => SUBCLASS : 3.1.1
1lsh_B_1406 - HA => SUBCLASS : 4.11.2
1lsh_B_1391 - HA => SUBCLASS : 9.13.1

Loops not clustered in ArchDB

1lsh_B_1484 - AR
1lsh_B_1375 - EH
1lsh_B_1447 - EH
1lsh_B_1360 - HA
1lsh_B_1418 - HA
1lsh_B_1432 - HA
1lsh_B_1460 - HH

null nu - percentage of sequence identity: 0