PDB: 1lss Compound: trk system potassium uptake protein trka homolog Classification: TRANSPORT PROTEIN Entry date in PDB: 2002-07-03 Resolution [Å]: 2.30 R-Factor: 0.220

CHAIN: A SWISS-PROT/TREMBL: Q58505    KEYWORD: 3D-structure    Complete proteome    NAD    Potassium transport    Transport    SCOP: c.2.1.9 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Potassium channel NAD-binding domain    Ktn Mja218    Archaeon Methanococcus jannaschii GO:  cation transporter activity    potassium ion transport    CHAIN: B SWISS-PROT/TREMBL: Q58505    KEYWORD: 3D-structure    Complete proteome    NAD    Potassium transport    Transport    SCOP: c.2.1.9 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Potassium channel NAD-binding domain    Ktn Mja218    Archaeon Methanococcus jannaschii GO:  cation transporter activity    potassium ion transport    CHAIN: C SWISS-PROT/TREMBL: Q58505    KEYWORD: 3D-structure    Complete proteome    NAD    Potassium transport    Transport    SCOP: c.2.1.9 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Potassium channel NAD-binding domain    Ktn Mja218    Archaeon Methanococcus jannaschii GO:  cation transporter activity    potassium ion transport    CHAIN: D SWISS-PROT/TREMBL: Q58505    KEYWORD: 3D-structure    Complete proteome    NAD    Potassium transport    Transport    SCOP: c.2.1.9 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Potassium channel NAD-binding domain    Ktn Mja218    Archaeon Methanococcus jannaschii GO:  cation transporter activity    potassium ion transport

Image Source: PDB

Loops in ArchDB40 clusters

1lss_A_25 - EH => SUBCLASS : 2.1.1
1lss_A_94 - EH => SUBCLASS : 2.1.2
1lss_A_94 - EH => SUBCLASS : 2.1.5
1lss_A_94 - EH => SUBCLASS : 2.1.8
1lss_A_68 - EH => SUBCLASS : 4.24.4

Loops in ArchDB95 clusters

1lss_A_25 - EH => SUBCLASS : 2.1.1
1lss_A_25 - EH => SUBCLASS : 2.1.2
1lss_A_68 - EH => SUBCLASS : 2.1.2
1lss_A_94 - EH => SUBCLASS : 2.1.5
1lss_A_68 - EH => SUBCLASS : 4.18.3
1lss_A_10 - HE => SUBCLASS : 1.1.1
1lss_A_33 - HE => SUBCLASS : 2.6.6
1lss_A_103 - HE => SUBCLASS : 3.1.1
1lss_A_76 - HE => SUBCLASS : 3.1.3

Loops not clustered in ArchDB

1lss_A_2 - EH
1lss_A_46 - EH
1lss_A_114 - EH
1lss_A_55 - HE

1lss A - percentage of sequence identity: 100
1lss B - percentage of sequence identity: 100
1lss C - percentage of sequence identity: 100
1lss D - percentage of sequence identity: 100