PDB: 1m0l Compound: bacteriorhodopsin Classification: ION TRANSPORT Entry date in PDB: 2002-09-11 Resolution [Å]: 1.47 R-Factor: 0.149

CHAIN: A SWISS-PROT/TREMBL: P02945    KEYWORD: 3D-structure    Complete proteome    Hydrogen ion transport    Ion transport    Photoreceptor    Pyrrolidone carboxylic acid    Retinal protein    Transmembrane    SCOP: f.13.1.1 Membrane and cell surface proteins and peptides    Family A G protein-coupled receptor-like    Family A G protein-coupled receptor-like    Bacteriorhodopsin-like    Bacteriorhodopsin    Archaeon Halobacterium salinarum GO:  membrane    membrane    ion channel activity    ion channel activity    ion transport    ion transport

Image Source: PDB

Loops in ArchDB40 clusters

1m0l_A_67 - HA => SUBCLASS : 2.1.1
1m0l_A_74 - EH => SUBCLASS : 1.1.36
1m0l_A_81 - HH => SUBCLASS : 3.2.2
1m0l_A_105 - HH => SUBCLASS : 3.4.2

Loops in ArchDB95 clusters

1m0l_A_74 - EH => SUBCLASS : 1.1.45
1m0l_A_81 - HH => SUBCLASS : 3.1.2
1m0l_A_105 - HH => SUBCLASS : 3.3.2
1m0l_A_67 - HA => SUBCLASS : 2.1.1

Loops not clustered in ArchDB

1m0l_A_37 - HE
1m0l_A_10 - HH
1m0l_A_131 - HH
1m0l_A_165 - HH

1ap9 - - percentage of sequence identity: 100
1at9 - - percentage of sequence identity: 99
1bct - - percentage of sequence identity: 100
1bha - - percentage of sequence identity: 100
1bhb - - percentage of sequence identity: 100
1bm1 - - percentage of sequence identity: 99
1brd - - percentage of sequence identity: 99
1brr A - percentage of sequence identity: 99
1brr B - percentage of sequence identity: 99
1brr C - percentage of sequence identity: 99
1brx - - percentage of sequence identity: 99
1c3w A - percentage of sequence identity: 97
1c8r A - percentage of sequence identity: 99
1cwq A - percentage of sequence identity: 99
1cwq B - percentage of sequence identity: 99
1dze A - percentage of sequence identity: 100
1e0p A - percentage of sequence identity: 100
1e0p B - percentage of sequence identity: 100
1f4z A - percentage of sequence identity: 99
1f50 A - percentage of sequence identity: 99
1fbb A - percentage of sequence identity: 100
1fbk A - percentage of sequence identity: 98
1iw6 A - percentage of sequence identity: 100
1iw9 A - percentage of sequence identity: 100
1ixf A - percentage of sequence identity: 100
1jv6 A - percentage of sequence identity: 99
1jv7 A - percentage of sequence identity: 99
1kg8 A - percentage of sequence identity: 100
1kg9 A - percentage of sequence identity: 100
1kgb A - percentage of sequence identity: 100
1kme A - percentage of sequence identity: 100
1kme B - percentage of sequence identity: 100
1l0m A - percentage of sequence identity: 100
1m0k A - percentage of sequence identity: 100
1m0m A - percentage of sequence identity: 100
1mgy A - percentage of sequence identity: 99
1o0a A - percentage of sequence identity: 100
1p8h A - percentage of sequence identity: 100
1p8i A - percentage of sequence identity: 99
1p8u A - percentage of sequence identity: 99
1pxr A - percentage of sequence identity: 99
1pxr B - percentage of sequence identity: 99
1pxs A - percentage of sequence identity: 99
1pxs B - percentage of sequence identity: 99
1py6 A - percentage of sequence identity: 100
1py6 B - percentage of sequence identity: 100
1q5i A - percentage of sequence identity: 99
1q5i B - percentage of sequence identity: 99
1q5j A - percentage of sequence identity: 99
1q5j B - percentage of sequence identity: 99
1qhj A - percentage of sequence identity: 100
1qko A - percentage of sequence identity: 100
1qkp A - percentage of sequence identity: 100
1qm8 A - percentage of sequence identity: 100
1r2n A - percentage of sequence identity: 100
1r84 A - percentage of sequence identity: 100
1s51 A - percentage of sequence identity: 99
1s51 B - percentage of sequence identity: 99
1s52 A - percentage of sequence identity: 99
1s52 B - percentage of sequence identity: 99
1s53 A - percentage of sequence identity: 99
1s53 B - percentage of sequence identity: 99
1s54 A - percentage of sequence identity: 99
1s54 B - percentage of sequence identity: 99
1s8j A - percentage of sequence identity: 99
1s8l A - percentage of sequence identity: 99
1tn0 A - percentage of sequence identity: 99
1tn0 B - percentage of sequence identity: 99
1tn5 A - percentage of sequence identity: 99
1tn5 B - percentage of sequence identity: 99
1uaz A - percentage of sequence identity: 60
1uaz B - percentage of sequence identity: 60
1ucq A - percentage of sequence identity: 100
1vjm A - percentage of sequence identity: 100
1x0i 1 - percentage of sequence identity: 100
1x0k 1 - percentage of sequence identity: 100
1x0s A - percentage of sequence identity: 100
1xji A - percentage of sequence identity: 100
2at9 - - percentage of sequence identity: 99
2brd - - percentage of sequence identity: 99