PDB: 1m1h Compound: transcription antitermination protein nusg Classification: TRANSCRIPTION Entry date in PDB: 2003-02-04 Resolution [Å]: 1.95 R-Factor: 0.234

CHAIN: A SWISS-PROT/TREMBL: O67757    KEYWORD: 3D-structure    Complete proteome    Transcription antitermination    Transcription termination    SCOP: b.114.1.1 All beta proteins    N-utilization substance G protein NusG, insert domain    N-utilization substance G protein NusG, insert domain    N-utilization substance G protein NusG, insert domain    N-utilization substance G protein NusG, insert domain    Aquifex aeolicus SCOP: d.58.42.1 Alpha and beta proteins (a+b)    Ferredoxin-like    N-utilization substance G protein NusG, N-terminal domain    N-utilization substance G protein NusG, N-terminal domain    N-utilization substance G protein NusG, N-terminal domain    Aquifex aeolicus SCOP: d.58.42.1 Alpha and beta proteins (a+b)    Ferredoxin-like    N-utilization substance G protein NusG, N-terminal domain    N-utilization substance G protein NusG, N-terminal domain    N-utilization substance G protein NusG, N-terminal domain    Aquifex aeolicus GO:  transcriptional elongation regulator activity    regulation of transcription, DNA-dependent

Image Source: PDB

Loops in ArchDB40 clusters

1m1h_A_147 - HE => SUBCLASS : 3.3.1
1m1h_A_23 - HE => SUBCLASS : 5.5.1
1m1h_A_164 - HA => SUBCLASS : 2.1.1
1m1h_A_73 - HA => SUBCLASS : 2.2.1
1m1h_A_51 - HA => SUBCLASS : 2.4.1
1m1h_A_83 - HA => SUBCLASS : 3.27.1
1m1h_A_116 - HA => SUBCLASS : 4.1.4
1m1h_A_171 - EH => SUBCLASS : 1.1.1
1m1h_A_12 - EH => SUBCLASS : 1.4.2
1m1h_A_138 - EH => SUBCLASS : 3.8.4

Loops in ArchDB95 clusters

1m1h_A_171 - EH => SUBCLASS : 1.1.25
1m1h_A_12 - EH => SUBCLASS : 1.4.3
1m1h_A_138 - EH => SUBCLASS : 3.8.5
1m1h_A_138 - EH => SUBCLASS : 3.8.7
1m1h_A_147 - HE => SUBCLASS : 3.6.1
1m1h_A_23 - HE => SUBCLASS : 5.7.2
1m1h_A_164 - HA => SUBCLASS : 2.1.1
1m1h_A_51 - HA => SUBCLASS : 2.1.2
1m1h_A_73 - HA => SUBCLASS : 2.2.1
1m1h_A_73 - HA => SUBCLASS : 3.1.1
1m1h_A_83 - HA => SUBCLASS : 3.1.1
1m1h_A_116 - HA => SUBCLASS : 4.1.3

Loops not clustered in ArchDB

1m1h_A_43 - AR
1m1h_A_61 - AR
1m1h_A_93 - AR
1m1h_A_124 - AR
1m1h_A_159 - AR
1m1h_A_168 - AR

1m1g A - percentage of sequence identity: 100
1m1g B - percentage of sequence identity: 100
1m1g C - percentage of sequence identity: 100
1m1g D - percentage of sequence identity: 100
1npp B - percentage of sequence identity: 100
1npp C - percentage of sequence identity: 100
1npp D - percentage of sequence identity: 100
1npr A - percentage of sequence identity: 100
1nz9 A - percentage of sequence identity: 63