PDB: 1m6d Compound: cathepsin f Classification: HYDROLASE Entry date in PDB: 2003-07-15 Resolution [Å]: 1.70 R-Factor: 0.195

CHAIN: A SWISS-PROT/TREMBL: Q9UBX1    KEYWORD: 3D-structure    Glycoprotein    Hydrolase    Lysosome    Signal    Thiol protease    Zymogen    EC: 3.4.22.41 SCOP: d.3.1.1 Alpha and beta proteins (a+b)    Cysteine proteinases    Cysteine proteinases    Papain-like    Cathepsin F    Human (Homo sapiens) GO:  cysteine-type endopeptidase activity    cysteine-type peptidase activity    proteolysis and peptidolysis    CHAIN: B SWISS-PROT/TREMBL: Q9UBX1    KEYWORD: 3D-structure    Glycoprotein    Hydrolase    Lysosome    Signal    Thiol protease    Zymogen    EC: 3.4.22.41 SCOP: d.3.1.1 Alpha and beta proteins (a+b)    Cysteine proteinases    Cysteine proteinases    Papain-like    Cathepsin F    Human (Homo sapiens) GO:  cysteine-type endopeptidase activity    cysteine-type peptidase activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB95 clusters

1m6d_A_109 - EH => SUBCLASS : 2.1.9
1m6d_A_5 - EH => SUBCLASS : 16.1.1
1m6d_A_186 - AR => SUBCLASS : 11.7.1
1m6d_A_25 - HH => SUBCLASS : 7.1.1
1m6d_A_50 - HH => SUBCLASS : 11.3.1
1m6d_A_117 - HE => SUBCLASS : 2.8.1
1m6d_A_168 - HA => SUBCLASS : 11.1.1

Loops in ArchDB-EC clusters

1m6d_A_50 - HH => SUBCLASS : 11.3.1

Loops not clustered in ArchDB

1m6d_A_148 - AR
1m6d_A_148 - AR
1m6d_A_186 - AR
1m6d_A_130 - EH
1m6d_A_159 - HA
1m6d_A_159 - HA
1m6d_A_168 - HA
1m6d_A_68 - HE
1m6d_A_139 - HE

1m6d A - percentage of sequence identity: 100
1m6d B - percentage of sequence identity: 100