PDB: 1mji Compound: 50s ribosomal protein l5 Classification: RIBOSOME Entry date in PDB: 2003-01-21 Resolution [Å]: 2.50 R-Factor: 0.210

CHAIN: A SWISS-PROT/TREMBL: P41201    KEYWORD: 3D-structure    Ribosomal protein    RNA-binding    rRNA-binding    tRNA-binding    SCOP: d.77.1.1 Alpha and beta proteins (a+b)    Ribosomal protein L5    Ribosomal protein L5    Ribosomal protein L5    Ribosomal protein L5    Thermus thermophilus GO:  intracellular    ribosome    structural constituent of ribosome    protein biosynthesis    CHAIN: B SWISS-PROT/TREMBL: P41201    KEYWORD: 3D-structure    Ribosomal protein    RNA-binding    rRNA-binding    tRNA-binding    SCOP: d.77.1.1 Alpha and beta proteins (a+b)    Ribosomal protein L5    Ribosomal protein L5    Ribosomal protein L5    Ribosomal protein L5    Thermus thermophilus GO:  intracellular    ribosome    structural constituent of ribosome    protein biosynthesis

Image Source: PDB

Loops in ArchDB95 clusters

1mji_A_157 - EH => SUBCLASS : 4.18.1
1mji_A_157 - EH => SUBCLASS : 4.18.4
1mji_A_50 - HE => SUBCLASS : 4.5.1
1mji_A_139 - HA => SUBCLASS : 2.2.1
1mji_A_139 - HA => SUBCLASS : 2.2.3

Loops not clustered in ArchDB

1mji_A_130 - AR
1mji_A_145 - AR
1mji_A_34 - EH
1mji_A_87 - EH
1mji_A_69 - HA
1mji_A_15 - HE
1mji_A_101 - HE
1mji_A_6 - HH

1iq4 A - percentage of sequence identity: 61
1iq4 B - percentage of sequence identity: 61
1mji A - percentage of sequence identity: 100
1mji B - percentage of sequence identity: 100
1nkw D - percentage of sequence identity: 70
1nwx D - percentage of sequence identity: 70
1nwy D - percentage of sequence identity: 70
1pnu D - percentage of sequence identity: 70
1pny D - percentage of sequence identity: 70
1sm1 D - percentage of sequence identity: 70
1vor G - percentage of sequence identity: 70
1vou G - percentage of sequence identity: 70
1vow G - percentage of sequence identity: 70
1voy G - percentage of sequence identity: 70
1vp0 G - percentage of sequence identity: 70
1xbp D - percentage of sequence identity: 70