PDB: 1mml Compound: mmlv reverse transcriptase Classification: REVERSE TRANSCRIPTASE Entry date in PDB: 1995-10-15 Resolution [Å]: 1.80 R-Factor: 0.198

CHAIN: - SWISS-PROT/TREMBL: P03355    KEYWORD: 3D-structure    Aspartyl protease    Endonuclease    Hydrolase    Polyprotein    RNA-directed DNA polymerase    Transferase    EC: 2.7.7.49 SCOP: e.8.1.2 Multi-domain proteins (alpha and beta)    DNA/RNA polymerases    DNA/RNA polymerases    Reverse transcriptase    MMLV reverse transcriptase    Moloney murine leukaemia virus, MoMLV GO:  aspartic-type endopeptidase activity    DNA binding    nucleic acid binding    ribonuclease H activity    RNA binding    RNA-directed DNA polymerase activity    DNA recombination    proteolysis and peptidolysis    RNA-dependent DNA replication

Image Source: PDB

Loops in ArchDB40 clusters

1mml_*_266 - HA => SUBCLASS : 2.1.1
1mml_*_218 - HA => SUBCLASS : 2.3.1
1mml_*_225 - EH => SUBCLASS : 2.1.1
1mml_*_260 - AR => SUBCLASS : 1.1.23

Loops in ArchDB95 clusters

1mml_*_225 - EH => SUBCLASS : 2.1.1
1mml_*_225 - EH => SUBCLASS : 2.1.8
1mml_*_179 - EH => SUBCLASS : 7.30.1
1mml_*_260 - AR => SUBCLASS : 1.2.23
1mml_*_145 - AR => SUBCLASS : 19.4.1
1mml_*_266 - HA => SUBCLASS : 2.1.1
1mml_*_218 - HA => SUBCLASS : 2.3.1

Loops in ArchDB-EC clusters

1mml_*_208 - HE => SUBCLASS : 4.1.2

Loops not clustered in ArchDB

1mml_*_260 - AR
1mml_*_145 - AR
1mml_*_87 - AR
1mml_*_87 - AR
1mml_*_110 - EH
1mml_*_218 - HA
1mml_*_170 - HA
1mml_*_98 - HA
1mml_*_170 - HA
1mml_*_98 - HA
1mml_*_266 - HA
1mml_*_233 - HE
1mml_*_132 - HE
1mml_*_68 - HE
1mml_*_195 - HH
1mml_*_116 - HH
1mml_*_34 - HH
1mml_*_25 - HH

1d0e A - percentage of sequence identity: 100
1d0e B - percentage of sequence identity: 100
1d1u A - percentage of sequence identity: 100
1i6j A - percentage of sequence identity: 100
1n4l A - percentage of sequence identity: 100
1nnd A - percentage of sequence identity: 99
1qai A - percentage of sequence identity: 100
1qai B - percentage of sequence identity: 100
1qaj A - percentage of sequence identity: 100
1qaj B - percentage of sequence identity: 100
1rw3 A - percentage of sequence identity: 100
1ztt A - percentage of sequence identity: 100
1ztw A - percentage of sequence identity: 100