PDB: 1mow Compound: chimera of homing endonuclease i-dmoi and DNA endo Classification: HYDROLASE/DNA Entry date in PDB: 2002-11-29 Resolution [Å]: 2.40 R-Factor: 0.231

CHAIN: A SWISS-PROT/TREMBL: P05725    KEYWORD: 3D-structure    Chloroplast    Endonuclease    Hydrolase    Intron homing    Nuclease    EC: 3.1.-.- SCOP: d.95.2.1 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Group I mobile intron endonuclease    DNA endonuclease I-CreI    Chlamydomonas reinhardtii SCOP: d.95.2.1 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Group I mobile intron endonuclease    DNA endonuclease I-dmoI    Archaeon Desulfurococcus mobilis GO:  DNA binding    endonuclease activity    endonuclease activity    intein-mediated protein splicing    intron homing    CHAIN: D SWISS-PROT/TREMBL: P05725    KEYWORD: 3D-structure    Chloroplast    Endonuclease    Hydrolase    Intron homing    Nuclease    EC: 3.1.-.- SCOP: d.95.2.1 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Group I mobile intron endonuclease    DNA endonuclease I-CreI    Chlamydomonas reinhardtii SCOP: d.95.2.1 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Group I mobile intron endonuclease    DNA endonuclease I-dmoI    Archaeon Desulfurococcus mobilis GO:  DNA binding    endonuclease activity    endonuclease activity    intein-mediated protein splicing    intron homing    CHAIN: G SWISS-PROT/TREMBL: P05725    KEYWORD: 3D-structure    Chloroplast    Endonuclease    Hydrolase    Intron homing    Nuclease    EC: 3.1.-.- SCOP: d.95.2.1 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Group I mobile intron endonuclease    DNA endonuclease I-CreI    Chlamydomonas reinhardtii SCOP: d.95.2.1 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Group I mobile intron endonuclease    DNA endonuclease I-dmoI    Archaeon Desulfurococcus mobilis GO:  DNA binding    endonuclease activity    endonuclease activity    intein-mediated protein splicing    intron homing    CHAIN: J SWISS-PROT/TREMBL: P05725    KEYWORD: 3D-structure    Chloroplast    Endonuclease    Hydrolase    Intron homing    Nuclease    EC: 3.1.-.- SCOP: d.95.2.1 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Group I mobile intron endonuclease    DNA endonuclease I-CreI    Chlamydomonas reinhardtii SCOP: d.95.2.1 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Group I mobile intron endonuclease    DNA endonuclease I-dmoI    Archaeon Desulfurococcus mobilis GO:  DNA binding    endonuclease activity    endonuclease activity    intein-mediated protein splicing    intron homing

Image Source: PDB

Loops in ArchDB95 clusters

1mow_A_134 - EH => SUBCLASS : 1.2.14
1mow_A_178 - HH => SUBCLASS : 1.1.28
1mow_A_45 - HE => SUBCLASS : 4.19.1
1mow_A_45 - HE => SUBCLASS : 4.19.3
1mow_A_21 - HA => SUBCLASS : 2.1.4
1mow_A_21 - HA => SUBCLASS : 2.1.5

Loops not clustered in ArchDB

1mow_A_33 - EH
1mow_A_78 - EH
1mow_A_170 - EH
1mow_A_69 - HA
1mow_A_117 - HA
1mow_A_163 - HA
1mow_A_149 - HE
1mow_A_103 - HE
1mow_A_7 - HE
1mow_A_85 - HH
1mow_A_196 - HH
1mow_A_216 - HH

1af5 - - percentage of sequence identity: 95
1b24 A - percentage of sequence identity: 86
1bp7 A - percentage of sequence identity: 96
1bp7 B - percentage of sequence identity: 96
1bp7 C - percentage of sequence identity: 96
1bp7 D - percentage of sequence identity: 96
1g9y A - percentage of sequence identity: 96
1g9y B - percentage of sequence identity: 96
1g9z A - percentage of sequence identity: 96
1g9z B - percentage of sequence identity: 96
1mow A - percentage of sequence identity: 100
1mow D - percentage of sequence identity: 100
1mow G - percentage of sequence identity: 100
1mow J - percentage of sequence identity: 100
1n3e A - percentage of sequence identity: 96
1n3e B - percentage of sequence identity: 96
1n3e G - percentage of sequence identity: 96
1n3e H - percentage of sequence identity: 96
1n3f A - percentage of sequence identity: 96
1n3f B - percentage of sequence identity: 96
1n3f G - percentage of sequence identity: 96
1n3f H - percentage of sequence identity: 96
1t9i A - percentage of sequence identity: 96
1t9i B - percentage of sequence identity: 96
1t9j A - percentage of sequence identity: 96
1t9j B - percentage of sequence identity: 96
1u0c A - percentage of sequence identity: 95
1u0c B - percentage of sequence identity: 95
1u0d A - percentage of sequence identity: 95
1u0d B - percentage of sequence identity: 95