PDB: 1mqk Compound: antibody 7e2 fv fragment, light chain Classification: IMMUNE SYSTEM Entry date in PDB: 2003-04-01 Resolution [Å]: 1.28 R-Factor: 0.136

CHAIN: H SWISS-PROT/TREMBL: P18525    KEYWORD: Immunoglobulin V region    Signal    SCOP: b.1.1.1 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    V set domains (antibody variable domain-like)    Immunoglobulin heavy chain variable domain, VH    Mouse (Mus musculus), cluster 2.2 GO:   CHAIN: L SWISS-PROT/TREMBL: P01636    KEYWORD: Immunoglobulin V region    SCOP: b.1.1.1 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    V set domains (antibody variable domain-like)    Immunoglobulin light chain kappa variable domain, VL-kappa    Mouse (Mus musculus), cluster 4 GO:

Image Source: PDB

Loops in ArchDB95 clusters

1mqk_H_11 - AR => SUBCLASS : 4.1.1
1mqk_L_10 - AR => SUBCLASS : 4.1.1
1mqk_H_78 - AR => SUBCLASS : 7.1.1
1mqk_L_70 - AR => SUBCLASS : 7.1.1
1mqk_H_58 - AR => SUBCLASS : 7.2.1
1mqk_L_53 - AR => SUBCLASS : 7.3.1
1mqk_L_19 - AR => SUBCLASS : 7.6.1
1mqk_H_18 - AR => SUBCLASS : 8.1.1
1mqk_L_62 - HA => SUBCLASS : 2.3.9
1mqk_H_34 - HA => SUBCLASS : 3.1.1
1mqk_L_45 - HA => SUBCLASS : 3.4.1
1mqk_H_68 - HA => SUBCLASS : 4.1.1
1mqk_H_45 - HA => SUBCLASS : 5.2.3
1mqk_L_33 - HA => SUBCLASS : 5.3.1

Loops not clustered in ArchDB

1mqk_L_4 - AR
1mqk_H_3 - AR
1mqk_H_104 - AR
1mqk_L_84 - HA
1mqk_H_92 - HA

1a5f H - percentage of sequence identity: 60
1a7q L - percentage of sequence identity: 78
1ad0 A - percentage of sequence identity: 60
1ad0 B - percentage of sequence identity: 63
1ad0 D - percentage of sequence identity: 63
1adq H - percentage of sequence identity: 62
1aif B - percentage of sequence identity: 68
1aif H - percentage of sequence identity: 68
1aqk H - percentage of sequence identity: 65
1ar1 C - percentage of sequence identity: 100
1axt H - percentage of sequence identity: 63
1b0w A - percentage of sequence identity: 64
1bfo B - percentage of sequence identity: 60
1bfo D - percentage of sequence identity: 60
1bfo F - percentage of sequence identity: 60
1bfo H - percentage of sequence identity: 60
1bfv H - percentage of sequence identity: 73
1bj1 H - percentage of sequence identity: 60
1bj1 K - percentage of sequence identity: 60
1bln B - percentage of sequence identity: 80
1bln D - percentage of sequence identity: 80
1bm3 H - percentage of sequence identity: 73
1bww A - percentage of sequence identity: 62
1bz7 B - percentage of sequence identity: 69
1cbv H - percentage of sequence identity: 62
1ck0 H - percentage of sequence identity: 65
1clo H - percentage of sequence identity: 61
1cly H - percentage of sequence identity: 75
1clz H - percentage of sequence identity: 73
1cz8 Y - percentage of sequence identity: 60
1d5i L - percentage of sequence identity: 63
1dee B - percentage of sequence identity: 66
1dee D - percentage of sequence identity: 66
1dee F - percentage of sequence identity: 66
1dfb H - percentage of sequence identity: 64
1dlf H - percentage of sequence identity: 63
1dql H - percentage of sequence identity: 69
1dzb A - percentage of sequence identity: 65
1f4w H - percentage of sequence identity: 78
1f4y H - percentage of sequence identity: 78
1fgv H - percentage of sequence identity: 65
1fgv L - percentage of sequence identity: 66
1fh5 H - percentage of sequence identity: 79
1fl3 A - percentage of sequence identity: 72
1fl3 H - percentage of sequence identity: 72
1fl5 H - percentage of sequence identity: 66
1fl6 B - percentage of sequence identity: 66
1fl6 H - percentage of sequence identity: 66
1frg H - percentage of sequence identity: 74
1fvc D - percentage of sequence identity: 66
1fvd B - percentage of sequence identity: 66
1fvd D - percentage of sequence identity: 66
1fve B - percentage of sequence identity: 66
1fve D - percentage of sequence identity: 66
1g6v K - percentage of sequence identity: 60
1g9e A - percentage of sequence identity: 65
1h0d B - percentage of sequence identity: 80
1h3p H - percentage of sequence identity: 72
1hez B - percentage of sequence identity: 66
1hez D - percentage of sequence identity: 66
1hil B - percentage of sequence identity: 81
1hil D - percentage of sequence identity: 81
1him L - percentage of sequence identity: 81
1him M - percentage of sequence identity: 81
1hin H - percentage of sequence identity: 81
1hyy H - percentage of sequence identity: 71
1i8i B - percentage of sequence identity: 75
1i8k B - percentage of sequence identity: 75
1i9i H - percentage of sequence identity: 74
1i9j H - percentage of sequence identity: 74
1iai I - percentage of sequence identity: 68
1ieh A - percentage of sequence identity: 74
1ifh H - percentage of sequence identity: 81
1igc H - percentage of sequence identity: 72
1igf H - percentage of sequence identity: 74
1igf J - percentage of sequence identity: 74
1igm H - percentage of sequence identity: 67
1igm L - percentage of sequence identity: 64
1igt B - percentage of sequence identity: 89
1igt D - percentage of sequence identity: 89
1ine H - percentage of sequence identity: 67
1iqd A - percentage of sequence identity: 60
1jgv H - percentage of sequence identity: 72
1jhl L - percentage of sequence identity: 64
1jps H - percentage of sequence identity: 63
1kem H - percentage of sequence identity: 63
1kfa H - percentage of sequence identity: 74
1kfa I - percentage of sequence identity: 74
1kno B - percentage of sequence identity: 74
1kno D - percentage of sequence identity: 74
1kno F - percentage of sequence identity: 74
1l7i H - percentage of sequence identity: 66
1l7i L - percentage of sequence identity: 63
1lo0 H - percentage of sequence identity: 73
1lo0 Y - percentage of sequence identity: 73
1lo2 H - percentage of sequence identity: 73
1lo2 Y - percentage of sequence identity: 73
1lo3 H - percentage of sequence identity: 73
1lo3 Y - percentage of sequence identity: 73
1m71 B - percentage of sequence identity: 66
1m7d B - percentage of sequence identity: 66
1m7i B - percentage of sequence identity: 66
1mam H - percentage of sequence identity: 64
1mcp H - percentage of sequence identity: 62
1mf2 H - percentage of sequence identity: 68
1mf2 N - percentage of sequence identity: 68
1mhp H - percentage of sequence identity: 73
1mhp X - percentage of sequence identity: 73
1n8z B - percentage of sequence identity: 66
1nfd F - percentage of sequence identity: 63
1nfd H - percentage of sequence identity: 63
1nl0 H - percentage of sequence identity: 69
1ohq B - percentage of sequence identity: 66
1ol0 B - percentage of sequence identity: 67
1opg H - percentage of sequence identity: 73
1ots C - percentage of sequence identity: 61
1ots E - percentage of sequence identity: 61
1ott C - percentage of sequence identity: 61
1ott E - percentage of sequence identity: 61
1otu C - percentage of sequence identity: 61
1otu E - percentage of sequence identity: 61
1pg7 H - percentage of sequence identity: 63
1pg7 I - percentage of sequence identity: 63
1pz5 B - percentage of sequence identity: 66
1q1j H - percentage of sequence identity: 61
1q1j I - percentage of sequence identity: 61
1q72 H - percentage of sequence identity: 61
1q9k B - percentage of sequence identity: 62
1q9l B - percentage of sequence identity: 62
1q9l D - percentage of sequence identity: 62
1q9o B - percentage of sequence identity: 62
1q9o D - percentage of sequence identity: 62
1q9q B - percentage of sequence identity: 62
1q9r B - percentage of sequence identity: 62
1q9t B - percentage of sequence identity: 62
1q9v B - percentage of sequence identity: 62
1q9w D - percentage of sequence identity: 62
1qfw I - percentage of sequence identity: 72
1qgc 4 - percentage of sequence identity: 74
1qle H - percentage of sequence identity: 100
1qyg H - percentage of sequence identity: 61
1r24 B - percentage of sequence identity: 69
1r24 D - percentage of sequence identity: 69
1rfd H - percentage of sequence identity: 61
1riu H - percentage of sequence identity: 61
1riv H - percentage of sequence identity: 61
1s3k H - percentage of sequence identity: 66
1s78 D - percentage of sequence identity: 66
1s78 F - percentage of sequence identity: 66
1sbs H - percentage of sequence identity: 65
1seq H - percentage of sequence identity: 79
1sjv A - percentage of sequence identity: 66
1sjx A - percentage of sequence identity: 61
1t2j A - percentage of sequence identity: 74
1t66 D - percentage of sequence identity: 63
1t66 H - percentage of sequence identity: 63
1tzh B - percentage of sequence identity: 65
1tzh H - percentage of sequence identity: 65
1tzi B - percentage of sequence identity: 68
1u0q A - percentage of sequence identity: 63
1u0q B - percentage of sequence identity: 63
1ub5 H - percentage of sequence identity: 73
1ub6 A - percentage of sequence identity: 72
1ub6 H - percentage of sequence identity: 72
1uz6 F - percentage of sequence identity: 68
1uz6 H - percentage of sequence identity: 68
1uz6 P - percentage of sequence identity: 68
1uz6 W - percentage of sequence identity: 68
1uz8 B - percentage of sequence identity: 68
1uz8 H - percentage of sequence identity: 68
1v7m H - percentage of sequence identity: 60
1v7m I - percentage of sequence identity: 60
1v7n H - percentage of sequence identity: 60
1v7n I - percentage of sequence identity: 60
1v7n J - percentage of sequence identity: 60
1v7n K - percentage of sequence identity: 60
1vhp - - percentage of sequence identity: 73
1vpo H - percentage of sequence identity: 74
1w72 H - percentage of sequence identity: 70
1w72 I - percentage of sequence identity: 70
1wc7 B - percentage of sequence identity: 62
1wc7 H - percentage of sequence identity: 62
1wtl A - percentage of sequence identity: 63
1wz1 H - percentage of sequence identity: 64
1x9q A - percentage of sequence identity: 61
1y0l B - percentage of sequence identity: 63
1y0l D - percentage of sequence identity: 63
1y0l F - percentage of sequence identity: 63
1y0l H - percentage of sequence identity: 63
1y18 B - percentage of sequence identity: 63
1y18 D - percentage of sequence identity: 63
1y18 F - percentage of sequence identity: 63
1y18 H - percentage of sequence identity: 63
1yc7 A - percentage of sequence identity: 60
1yc7 B - percentage of sequence identity: 60
1yc8 A - percentage of sequence identity: 62
1yc8 B - percentage of sequence identity: 62
1yzz A - percentage of sequence identity: 62
1yzz B - percentage of sequence identity: 62
1za3 B - percentage of sequence identity: 65
1za3 H - percentage of sequence identity: 65
2a1w H - percentage of sequence identity: 71
2a1w I - percentage of sequence identity: 71
2a77 H - percentage of sequence identity: 71
2a9m H - percentage of sequence identity: 64
2a9m I - percentage of sequence identity: 64
2a9n H - percentage of sequence identity: 64
2a9n I - percentage of sequence identity: 64
2aab H - percentage of sequence identity: 68
2adg B - percentage of sequence identity: 80
2adi B - percentage of sequence identity: 80
2adj B - percentage of sequence identity: 80
2aep H - percentage of sequence identity: 63
2aeq H - percentage of sequence identity: 63
2ai0 H - percentage of sequence identity: 71
2ai0 I - percentage of sequence identity: 71
2ai0 J - percentage of sequence identity: 71
2ai0 K - percentage of sequence identity: 71
2bfv H - percentage of sequence identity: 73
2ck0 H - percentage of sequence identity: 65
2dlf H - percentage of sequence identity: 63
2exw C - percentage of sequence identity: 61
2exw E - percentage of sequence identity: 61
2exy C - percentage of sequence identity: 61
2exy E - percentage of sequence identity: 61
2ez0 C - percentage of sequence identity: 61
2ez0 E - percentage of sequence identity: 61
2fec I - percentage of sequence identity: 61
2fec J - percentage of sequence identity: 61
2fed C - percentage of sequence identity: 61
2fed E - percentage of sequence identity: 61
2fee I - percentage of sequence identity: 61
2fee J - percentage of sequence identity: 61
2fjf B - percentage of sequence identity: 71
2fjf D - percentage of sequence identity: 71
2fjf F - percentage of sequence identity: 71
2fjf H - percentage of sequence identity: 71
2fjf I - percentage of sequence identity: 71
2fjf K - percentage of sequence identity: 71
2fjf N - percentage of sequence identity: 71
2fjf P - percentage of sequence identity: 71
2fjf R - percentage of sequence identity: 71
2fjf T - percentage of sequence identity: 71
2fjf V - percentage of sequence identity: 71
2fjf X - percentage of sequence identity: 71
2fjg B - percentage of sequence identity: 71
2fjg H - percentage of sequence identity: 71
2fjh B - percentage of sequence identity: 65
2fjh H - percentage of sequence identity: 65
2gfb B - percentage of sequence identity: 71
2gfb D - percentage of sequence identity: 71
2gfb F - percentage of sequence identity: 71
2gfb H - percentage of sequence identity: 71
2gfb J - percentage of sequence identity: 71
2gfb L - percentage of sequence identity: 71
2gfb N - percentage of sequence identity: 71
2gfb P - percentage of sequence identity: 71
2hrp N - percentage of sequence identity: 68
2igf H - percentage of sequence identity: 74
2mcp H - percentage of sequence identity: 62
3ck0 H - percentage of sequence identity: 65
4fab H - percentage of sequence identity: 66
8fab D - percentage of sequence identity: 66