PDB: 1mrj Compound: Alpha-trichosanthin complexed with adenine Classification: RIBOSOME-INACTIVATING PROTEIN Entry date in PDB: 1995-02-07 Resolution [Å]: 1.60 R-Factor: 0.173

CHAIN: - SWISS-PROT/TREMBL: P09989    KEYWORD: 3D-structure    Antiviral    Hydrolase    Plant defense    Protein synthesis inhibitor    Signal    Toxin    EC: 3.2.2.22 SCOP: d.165.1.1 Alpha and beta proteins (a+b)    Ribosome inactivating proteins (RIP)    Ribosome inactivating proteins (RIP)    Plant cytotoxins    alpha-Trichosanthin    Mongolian snake gourd (Trichosanthes kirilowii maxim) GO:  rRNA N-glycosylase activity    negative regulation of protein biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1mrj_*_43 - HE => SUBCLASS : 0.1.3
1mrj_*_27 - HA => SUBCLASS : 2.1.1
1mrj_*_70 - HA => SUBCLASS : 2.3.1
1mrj_*_46 - HA => SUBCLASS : 3.1.1
1mrj_*_59 - HA => SUBCLASS : 4.1.2
1mrj_*_208 - HA => SUBCLASS : 4.2.2
1mrj_*_208 - HA => SUBCLASS : 5.1.1
1mrj_*_208 - HA => SUBCLASS : 5.1.4
1mrj_*_79 - EH => SUBCLASS : 3.8.4
1mrj_*_2 - EH => SUBCLASS : 5.9.3
1mrj_*_101 - EH => SUBCLASS : 6.17.1
1mrj_*_159 - HH => SUBCLASS : 1.2.1
1mrj_*_129 - HH => SUBCLASS : 3.22.1

Loops in ArchDB95 clusters

1mrj_*_2 - EH => SUBCLASS : 5.48.1
1mrj_*_101 - EH => SUBCLASS : 6.36.1
1mrj_*_159 - HH => SUBCLASS : 1.2.1
1mrj_*_111 - HH => SUBCLASS : 10.23.1
1mrj_*_43 - HE => SUBCLASS : 0.1.2
1mrj_*_11 - HE => SUBCLASS : 2.13.1
1mrj_*_27 - HA => SUBCLASS : 2.1.1
1mrj_*_70 - HA => SUBCLASS : 2.3.1
1mrj_*_46 - HA => SUBCLASS : 3.1.1
1mrj_*_208 - HA => SUBCLASS : 3.1.1
1mrj_*_59 - HA => SUBCLASS : 4.1.2
1mrj_*_208 - HA => SUBCLASS : 5.1.4

Loops in ArchDB-EC clusters

1mrj_*_111 - HH => SUBCLASS : 10.7.1

Loops not clustered in ArchDB

1mrj_*_34 - EH
1mrj_*_222 - EH
1mrj_*_70 - HA
1mrj_*_59 - HA
1mrj_*_46 - HA
1mrj_*_27 - HA
1mrj_*_208 - HA
1mrj_*_183 - HE
1mrj_*_86 - HE
1mrj_*_144 - HH
1mrj_*_165 - HH

1aha - - percentage of sequence identity: 65
1ahb - - percentage of sequence identity: 65
1ahc - - percentage of sequence identity: 65
1bry Z - percentage of sequence identity: 86
1cf5 B - percentage of sequence identity: 61
1d8v A - percentage of sequence identity: 61
1f8q A - percentage of sequence identity: 64
1gis A - percentage of sequence identity: 99
1giu A - percentage of sequence identity: 99
1j4g A - percentage of sequence identity: 100
1j4g B - percentage of sequence identity: 100
1j4g C - percentage of sequence identity: 100
1j4g D - percentage of sequence identity: 100
1mom - - percentage of sequence identity: 65
1mrh - - percentage of sequence identity: 64
1mri - - percentage of sequence identity: 64
1mrk - - percentage of sequence identity: 100
1nli A - percentage of sequence identity: 99
1qd2 A - percentage of sequence identity: 100
1tcs - - percentage of sequence identity: 100