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Information on 1nav
PDB: 1nav
Compound: hormone receptor alpha 1, thra1
Classification: MEMBRANE PROTEIN
Entry date in PDB: 2003-06-17
Resolution [Å]: 2.50
R-Factor: 0.246


CHAIN: A
SWISS-PROT/TREMBL: P10827
   KEYWORD: Alternative splicing    DNA-binding    Multigene family    Nuclear protein    Receptor    Transcription regulation    Zinc-finger   
SCOP: a.123.1.1 All alpha proteins    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Thyroid hormone receptor alpha1 (TR-alpha1)    Human (Homo sapiens)
GO:  nucleus    DNA binding    ligand-dependent nuclear receptor activity    steroid hormone receptor activity    thyroid hormone receptor activity    transcription factor activity    regulation of transcription, DNA-dependent   
1nav Image
Image Source: PDB

Stored Loops of 1nav

Loops in ArchDB95 clusters

1nav_A_212 - HH => SUBCLASS : 1.1.4
1nav_A_212 - HH => SUBCLASS : 1.2.37
1nav_A_294 - HH => SUBCLASS : 3.17.1
1nav_A_284 - HH => SUBCLASS : 3.27.1
1nav_A_335 - HH => SUBCLASS : 6.48.1
1nav_A_313 - HH => SUBCLASS : 7.17.1
1nav_A_244 - HE => SUBCLASS : 6.45.1
1nav_A_273 - HA => SUBCLASS : 3.7.1

Loops not clustered in ArchDB

1nav_A_280 - EH
1nav_A_148 - HH
1nav_A_164 - HH
1nav_A_237 - HH
1nav_A_363 - HH

Homologous structures to 1nav classified in ArchDB

1bsx A - percentage of sequence identity: 83
1bsx B - percentage of sequence identity: 83
1n46 B - percentage of sequence identity: 83
1nax A - percentage of sequence identity: 84
1nq0 A - percentage of sequence identity: 82
1nq1 A - percentage of sequence identity: 83
1nq2 A - percentage of sequence identity: 82
1nuo A - percentage of sequence identity: 83
1q4x A - percentage of sequence identity: 84
1r6g A - percentage of sequence identity: 83
1xzx X - percentage of sequence identity: 83
1y0x X - percentage of sequence identity: 83