PDB: 1nbf Compound: ubiquitin carboxyl-terminal hydrolase 7 Classification: HYDROLASE Entry date in PDB: 2003-01-07 Resolution [Å]: 2.30 R-Factor: 0.218

CHAIN: A SWISS-PROT/TREMBL: Q93009    KEYWORD: 3D-structure    Hydrolase    Multigene family    Nuclear protein    Thiol protease    Ubl conjugation pathway    EC: 3.1.2.15 SCOP: d.3.1.9 Alpha and beta proteins (a+b)    Cysteine proteinases    Cysteine proteinases    Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP)    Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP)    Human (Homo sapiens) GO:  cysteine-type endopeptidase activity    ubiquitin thiolesterase activity    ubiquitin-dependent protein catabolism    CHAIN: B SWISS-PROT/TREMBL: Q93009    KEYWORD: 3D-structure    Hydrolase    Multigene family    Nuclear protein    Thiol protease    Ubl conjugation pathway    EC: 3.1.2.15 SCOP: d.3.1.9 Alpha and beta proteins (a+b)    Cysteine proteinases    Cysteine proteinases    Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP)    Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP)    Human (Homo sapiens) GO:  cysteine-type endopeptidase activity    ubiquitin thiolesterase activity    ubiquitin-dependent protein catabolism    CHAIN: E SWISS-PROT/TREMBL: Q93009    KEYWORD: 3D-structure    Hydrolase    Multigene family    Nuclear protein    Thiol protease    Ubl conjugation pathway    EC: 3.1.2.15 SCOP: d.3.1.9 Alpha and beta proteins (a+b)    Cysteine proteinases    Cysteine proteinases    Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP)    Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP)    Human (Homo sapiens) GO:  cysteine-type endopeptidase activity    ubiquitin thiolesterase activity    ubiquitin-dependent protein catabolism

Image Source: PDB

Loops in ArchDB40 clusters

1nbf_A_360 - HE => SUBCLASS : 1.2.1
1nbf_A_319 - HE => SUBCLASS : 1.2.17
1nbf_A_360 - HE => SUBCLASS : 2.8.4
1nbf_A_478 - HA => SUBCLASS : 2.3.1
1nbf_A_409 - HA => SUBCLASS : 4.1.1
1nbf_A_326 - HA => SUBCLASS : 5.11.1
1nbf_A_484 - EH => SUBCLASS : 1.1.6
1nbf_A_511 - EH => SUBCLASS : 1.3.3
1nbf_A_340 - AR => SUBCLASS : 1.1.4
1nbf_A_223 - HH => SUBCLASS : 1.1.3

Loops in ArchDB95 clusters

1nbf_A_484 - EH => SUBCLASS : 1.1.6
1nbf_A_511 - EH => SUBCLASS : 1.2.1
1nbf_A_511 - EH => SUBCLASS : 1.2.2
1nbf_A_340 - AR => SUBCLASS : 1.2.2
1nbf_A_340 - AR => SUBCLASS : 1.2.7
1nbf_A_389 - AR => SUBCLASS : 3.8.8
1nbf_A_223 - HH => SUBCLASS : 1.1.1
1nbf_A_223 - HH => SUBCLASS : 1.1.4
1nbf_A_319 - HE => SUBCLASS : 1.4.1
1nbf_A_360 - HE => SUBCLASS : 2.7.2
1nbf_A_478 - HA => SUBCLASS : 2.3.1
1nbf_A_409 - HA => SUBCLASS : 4.1.1
1nbf_A_326 - HA => SUBCLASS : 4.30.1
1nbf_A_326 - HA => SUBCLASS : 5.10.1

Loops not clustered in ArchDB

1nbf_A_386 - AR
1nbf_A_417 - AR
1nbf_A_350 - EH
1nbf_A_371 - HA
1nbf_A_462 - HA
1nbf_A_447 - HA
1nbf_A_430 - HA
1nbf_A_401 - HA
1nbf_A_379 - HA
1nbf_A_490 - HE
1nbf_A_524 - HH
1nbf_A_296 - HH
1nbf_A_277 - HH
1nbf_A_256 - HH
1nbf_A_236 - HH
1nbf_A_538 - HH

1bt0 A - percentage of sequence identity: 63
1nb8 A - percentage of sequence identity: 100
1nb8 B - percentage of sequence identity: 100
1nbf A - percentage of sequence identity: 100
1nbf B - percentage of sequence identity: 100
1nbf E - percentage of sequence identity: 100
1ogw A - percentage of sequence identity: 97
2f1z A - percentage of sequence identity: 100
2f1z B - percentage of sequence identity: 100