PDB: 1nf4 Compound: bacterioferritin Classification: IRON STORAGE/ELECTRON TRANSPORT Entry date in PDB: 2003-04-01 Resolution [Å]: 2.05 R-Factor: 0.231

CHAIN: A SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: B SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: C SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: D SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: E SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: F SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: G SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: H SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: I SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: J SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: K SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: L SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: M SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: N SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: O SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport    CHAIN: P SWISS-PROT/TREMBL: Q93PP9    KEYWORD: 3D-structure    Heme    Iron    Iron storage    Metal-binding    SCOP: a.25.1.1 All alpha proteins    Ferritin-like    Ferritin-like    Ferritin    Bacterioferritin (cytochrome b1)    Desulfovibrio desulfuricans GO:  binding    ferric iron binding    iron ion homeostasis    iron ion transport

Image Source: PDB

Loops in ArchDB40 clusters

1nf4_A_88 - HH => SUBCLASS : 2.2.7

Loops in ArchDB95 clusters

1nf4_A_88 - HH => SUBCLASS : 2.2.5

Loops not clustered in ArchDB

1nf4_A_5 - HH
1nf4_A_43 - HH
1nf4_A_119 - HH

1nf4 A - percentage of sequence identity: 100
1nf4 B - percentage of sequence identity: 100
1nf4 C - percentage of sequence identity: 100
1nf4 D - percentage of sequence identity: 100
1nf4 E - percentage of sequence identity: 100
1nf4 F - percentage of sequence identity: 100
1nf4 G - percentage of sequence identity: 100
1nf4 H - percentage of sequence identity: 100
1nf4 I - percentage of sequence identity: 100
1nf4 J - percentage of sequence identity: 100
1nf4 K - percentage of sequence identity: 100
1nf4 L - percentage of sequence identity: 100
1nf4 M - percentage of sequence identity: 100
1nf4 N - percentage of sequence identity: 100
1nf4 O - percentage of sequence identity: 100
1nf4 P - percentage of sequence identity: 100
1nf6 A - percentage of sequence identity: 100
1nf6 B - percentage of sequence identity: 100
1nf6 C - percentage of sequence identity: 100
1nf6 D - percentage of sequence identity: 100
1nf6 E - percentage of sequence identity: 100
1nf6 F - percentage of sequence identity: 100
1nf6 G - percentage of sequence identity: 100
1nf6 H - percentage of sequence identity: 100
1nf6 I - percentage of sequence identity: 100
1nf6 J - percentage of sequence identity: 100
1nf6 K - percentage of sequence identity: 100
1nf6 L - percentage of sequence identity: 100
1nf6 M - percentage of sequence identity: 100
1nf6 N - percentage of sequence identity: 100
1nf6 O - percentage of sequence identity: 100
1nf6 P - percentage of sequence identity: 100
1nfv A - percentage of sequence identity: 100
1nfv B - percentage of sequence identity: 100
1nfv C - percentage of sequence identity: 100
1nfv D - percentage of sequence identity: 100
1nfv E - percentage of sequence identity: 100
1nfv F - percentage of sequence identity: 100
1nfv G - percentage of sequence identity: 100
1nfv H - percentage of sequence identity: 100
1nfv I - percentage of sequence identity: 100
1nfv J - percentage of sequence identity: 100
1nfv K - percentage of sequence identity: 100
1nfv L - percentage of sequence identity: 100
1nfv M - percentage of sequence identity: 100
1nfv N - percentage of sequence identity: 100
1nfv O - percentage of sequence identity: 100
1nfv P - percentage of sequence identity: 100