PDB: 1ngm Compound: transcription initiation factor tfiid Classification: TRANSCRIPTION/DNA Entry date in PDB: 2003-03-25 Resolution [Å]: 2.95 R-Factor: 0.278

CHAIN: A SWISS-PROT/TREMBL: P13393    KEYWORD: 3D-structure    DNA-binding    Nuclear protein    Repeat    Transcription    3D-structure    DNA-binding    Nuclear protein    Repeat    Transcription    SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Baker's yeast (Saccharomyces cerevisiae) SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Baker's yeast (Saccharomyces cerevisiae) GO:  nucleus    transcription factor TFIID complex    binding    DNA binding    RNA polymerase II transcription factor activity    regulation of transcription, DNA-dependent    transcription initiation from RNA polymerase II promoter    CHAIN: B SWISS-PROT/TREMBL: P29056    KEYWORD: 3D-structure    Activator    Metal-binding    Nuclear protein    Repeat    Transcription regulation    Zinc    Zinc-finger    3D-structure    Activator    Metal-binding    Nuclear protein    Repeat    Transcription regulation    Zinc    Zinc-finger    SCOP: j.104.1.1 Peptides    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    Baker's yeast (Saccharomyces cerevisiae) GO:  nucleus    transcription factor complex    transcription factor activity    transcriptional activator activity    zinc ion binding    positive regulation of transcription    regulation of transcription, DNA-dependent    transcription initiation    CHAIN: E SWISS-PROT/TREMBL: P13393    KEYWORD: 3D-structure    DNA-binding    Nuclear protein    Repeat    Transcription    3D-structure    DNA-binding    Nuclear protein    Repeat    Transcription    SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Baker's yeast (Saccharomyces cerevisiae) SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Baker's yeast (Saccharomyces cerevisiae) GO:  nucleus    transcription factor TFIID complex    binding    DNA binding    RNA polymerase II transcription factor activity    regulation of transcription, DNA-dependent    transcription initiation from RNA polymerase II promoter    CHAIN: F SWISS-PROT/TREMBL: P29056    KEYWORD: 3D-structure    Activator    Metal-binding    Nuclear protein    Repeat    Transcription regulation    Zinc    Zinc-finger    3D-structure    Activator    Metal-binding    Nuclear protein    Repeat    Transcription regulation    Zinc    Zinc-finger    SCOP: j.104.1.1 Peptides    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    Baker's yeast (Saccharomyces cerevisiae) GO:  nucleus    transcription factor complex    transcription factor activity    transcriptional activator activity    zinc ion binding    positive regulation of transcription    regulation of transcription, DNA-dependent    transcription initiation    CHAIN: I SWISS-PROT/TREMBL: P13393    KEYWORD: 3D-structure    DNA-binding    Nuclear protein    Repeat    Transcription    3D-structure    DNA-binding    Nuclear protein    Repeat    Transcription    SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Baker's yeast (Saccharomyces cerevisiae) SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Baker's yeast (Saccharomyces cerevisiae) GO:  nucleus    transcription factor TFIID complex    binding    DNA binding    RNA polymerase II transcription factor activity    regulation of transcription, DNA-dependent    transcription initiation from RNA polymerase II promoter    CHAIN: J SWISS-PROT/TREMBL: P29056    KEYWORD: 3D-structure    Activator    Metal-binding    Nuclear protein    Repeat    Transcription regulation    Zinc    Zinc-finger    SCOP: j.104.1.1 Peptides    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    Baker's yeast (Saccharomyces cerevisiae) GO:  nucleus    transcription factor complex    transcription factor activity    transcriptional activator activity    zinc ion binding    positive regulation of transcription    regulation of transcription, DNA-dependent    transcription initiation    CHAIN: M SWISS-PROT/TREMBL: P13393    KEYWORD: 3D-structure    DNA-binding    Nuclear protein    Repeat    Transcription    3D-structure    DNA-binding    Nuclear protein    Repeat    Transcription    SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Baker's yeast (Saccharomyces cerevisiae) SCOP: d.129.1.1 Alpha and beta proteins (a+b)    TBP-like    TATA-box binding protein-like    TATA-box binding protein (TBP), C-terminal domain    TATA-box binding protein (TBP), C-terminal domain    Baker's yeast (Saccharomyces cerevisiae) GO:  nucleus    transcription factor TFIID complex    binding    DNA binding    RNA polymerase II transcription factor activity    regulation of transcription, DNA-dependent    transcription initiation from RNA polymerase II promoter    CHAIN: N SWISS-PROT/TREMBL: P29056    KEYWORD: 3D-structure    Activator    Metal-binding    Nuclear protein    Repeat    Transcription regulation    Zinc    Zinc-finger    SCOP: j.104.1.1 Peptides    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    TBP-binding domain of the transcription factor IIIb Brf1 subunit    Baker's yeast (Saccharomyces cerevisiae) GO:  nucleus    transcription factor complex    transcription factor activity    transcriptional activator activity    zinc ion binding    positive regulation of transcription    regulation of transcription, DNA-dependent    transcription initiation

Image Source: PDB

1cdw A - percentage of sequence identity: 81
1nh2 A - percentage of sequence identity: 100
1qna A - percentage of sequence identity: 85
null nu - percentage of sequence identity: 0