PDB: 1nhp Compound: Nadh peroxidase (npx) mutant with cys 42 replaced Classification: OXIDOREDUCTASE (H2O2(A)) Entry date in PDB: 1995-02-14 Resolution [Å]: 2.00 R-Factor: 0.176

CHAIN: - SWISS-PROT/TREMBL: P37062    KEYWORD: 3D-structure    Complete proteome    FAD    Flavoprotein    NAD    Oxidoreductase    Redox-active center    EC: 1.11.1.1 SCOP: c.3.1.5 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    FAD/NAD-linked reductases, N-terminal and central domains    NADH peroxidase    Enterococcus faecalis SCOP: c.3.1.5 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    FAD/NAD-linked reductases, N-terminal and central domains    NADH peroxidase    Enterococcus faecalis SCOP: c.3.1.5 Alpha and beta proteins (a/b)    FAD/NAD(P)-binding domain    FAD/NAD(P)-binding domain    FAD/NAD-linked reductases, N-terminal and central domains    NADH peroxidase    Enterococcus faecalis SCOP: d.87.1.1 Alpha and beta proteins (a+b)    CO dehydrogenase flavoprotein C-domain-like    FAD/NAD-linked reductases, dimerisation (C-terminal) domain    FAD/NAD-linked reductases, dimerisation (C-terminal) domain    NADH peroxidase    Enterococcus faecalis GO:  cytoplasm    disulfide oxidoreductase activity    oxidoreductase activity    electron transport

Image Source: PDB

Loops in ArchDB40 clusters

1nhp_*_225 - HA => SUBCLASS : 2.2.13
1nhp_*_327 - HA => SUBCLASS : 2.3.1
1nhp_*_77 - HA => SUBCLASS : 4.1.1
1nhp_*_372 - HA => SUBCLASS : 4.1.2
1nhp_*_88 - HA => SUBCLASS : 4.1.2
1nhp_*_285 - HA => SUBCLASS : 4.1.2
1nhp_*_292 - EH => SUBCLASS : 2.3.8
1nhp_*_151 - EH => SUBCLASS : 3.2.1
1nhp_*_2 - EH => SUBCLASS : 3.2.1
1nhp_*_292 - EH => SUBCLASS : 3.8.7
1nhp_*_174 - EH => SUBCLASS : 11.2.1
1nhp_*_232 - AR => SUBCLASS : 1.1.3
1nhp_*_99 - AR => SUBCLASS : 1.1.3
1nhp_*_72 - AR => SUBCLASS : 1.2.2
1nhp_*_206 - AR => SUBCLASS : 1.2.3
1nhp_*_237 - AR => SUBCLASS : 3.11.1
1nhp_*_400 - HH => SUBCLASS : 3.2.1
1nhp_*_400 - HH => SUBCLASS : 3.2.2
1nhp_*_400 - HH => SUBCLASS : 3.3.1

Loops in ArchDB95 clusters

1nhp_*_292 - EH => SUBCLASS : 2.4.8
1nhp_*_292 - EH => SUBCLASS : 2.4.12
1nhp_*_2 - EH => SUBCLASS : 3.5.1
1nhp_*_174 - EH => SUBCLASS : 11.6.1
1nhp_*_206 - AR => SUBCLASS : 1.1.4
1nhp_*_72 - AR => SUBCLASS : 1.1.5
1nhp_*_99 - AR => SUBCLASS : 1.2.1
1nhp_*_232 - AR => SUBCLASS : 1.2.1
1nhp_*_206 - AR => SUBCLASS : 2.6.1
1nhp_*_237 - AR => SUBCLASS : 3.15.1
1nhp_*_400 - HH => SUBCLASS : 3.1.2
1nhp_*_400 - HH => SUBCLASS : 3.1.3
1nhp_*_400 - HH => SUBCLASS : 3.2.1
1nhp_*_159 - HE => SUBCLASS : 1.1.1
1nhp_*_63 - HE => SUBCLASS : 1.1.1
1nhp_*_191 - HE => SUBCLASS : 1.1.2
1nhp_*_191 - HE => SUBCLASS : 1.2.1
1nhp_*_343 - HE => SUBCLASS : 3.2.3
1nhp_*_10 - HE => SUBCLASS : 4.1.4
1nhp_*_343 - HE => SUBCLASS : 4.5.1
1nhp_*_133 - HE => SUBCLASS : 5.2.8
1nhp_*_225 - HA => SUBCLASS : 2.2.6
1nhp_*_327 - HA => SUBCLASS : 2.3.1
1nhp_*_77 - HA => SUBCLASS : 4.1.1
1nhp_*_88 - HA => SUBCLASS : 4.1.2
1nhp_*_372 - HA => SUBCLASS : 4.1.2
1nhp_*_285 - HA => SUBCLASS : 4.1.4

Loops in ArchDB-EC clusters

1nhp_*_400 - HH => SUBCLASS : 3.3.1

Loops not clustered in ArchDB

1nhp_*_244 - AR
1nhp_*_276 - AR
1nhp_*_72 - AR
1nhp_*_276 - AR
1nhp_*_113 - AR
1nhp_*_106 - AR
1nhp_*_237 - AR
1nhp_*_232 - AR
1nhp_*_99 - AR
1nhp_*_106 - AR
1nhp_*_113 - AR
1nhp_*_206 - AR
1nhp_*_244 - AR
1nhp_*_27 - EH
1nhp_*_386 - EH
1nhp_*_334 - EH
1nhp_*_128 - EH
1nhp_*_285 - HA
1nhp_*_327 - HA
1nhp_*_354 - HA
1nhp_*_225 - HA
1nhp_*_214 - HA
1nhp_*_88 - HA
1nhp_*_77 - HA
1nhp_*_354 - HA
1nhp_*_214 - HA
1nhp_*_372 - HA
1nhp_*_299 - HE
1nhp_*_414 - HH
1nhp_*_44 - HH

1f8w A - percentage of sequence identity: 99
1joa - - percentage of sequence identity: 99
1nhq - - percentage of sequence identity: 99
1nhr - - percentage of sequence identity: 99
1nhs - - percentage of sequence identity: 99
1npx - - percentage of sequence identity: 99
2npx - - percentage of sequence identity: 99