PDB: 1nkz Compound: light-harvesting protein b-800850, ALPHA CHAIN Classification: MEMBRANE PROTEIN Entry date in PDB: 2003-02-25 Resolution [Å]: 2.00 R-Factor: 0.170

CHAIN: A SWISS-PROT/TREMBL: P26789    KEYWORD: 3D-structure    Antenna complex    Bacteriochlorophyll    Inner membrane    Light-harvesting polypeptide    Magnesium    Transmembrane    SCOP: f.3.1.1 Membrane and cell surface proteins and peptides    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Purple bacterium (Rhodopseudomonas acidophila) GO:  inner membrane    integral to membrane    light-harvesting complex (sensu Proteobacteria)    electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity    photosynthesis, light reaction    CHAIN: B SWISS-PROT/TREMBL: P26790    KEYWORD: 3D-structure    Antenna complex    Bacteriochlorophyll    Inner membrane    Light-harvesting polypeptide    Magnesium    Transmembrane    SCOP: f.3.1.1 Membrane and cell surface proteins and peptides    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Purple bacterium (Rhodopseudomonas acidophila) GO:  inner membrane    integral to membrane    light-harvesting complex (sensu Proteobacteria)    electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity    photosynthesis, light reaction    CHAIN: C SWISS-PROT/TREMBL: P26789    KEYWORD: 3D-structure    Antenna complex    Bacteriochlorophyll    Inner membrane    Light-harvesting polypeptide    Magnesium    Transmembrane    SCOP: f.3.1.1 Membrane and cell surface proteins and peptides    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Purple bacterium (Rhodopseudomonas acidophila) GO:  inner membrane    integral to membrane    light-harvesting complex (sensu Proteobacteria)    electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity    photosynthesis, light reaction    CHAIN: D SWISS-PROT/TREMBL: P26790    KEYWORD: 3D-structure    Antenna complex    Bacteriochlorophyll    Inner membrane    Light-harvesting polypeptide    Magnesium    Transmembrane    SCOP: f.3.1.1 Membrane and cell surface proteins and peptides    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Purple bacterium (Rhodopseudomonas acidophila) GO:  inner membrane    integral to membrane    light-harvesting complex (sensu Proteobacteria)    electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity    photosynthesis, light reaction    CHAIN: E SWISS-PROT/TREMBL: P26789    KEYWORD: 3D-structure    Antenna complex    Bacteriochlorophyll    Inner membrane    Light-harvesting polypeptide    Magnesium    Transmembrane    SCOP: f.3.1.1 Membrane and cell surface proteins and peptides    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Purple bacterium (Rhodopseudomonas acidophila) GO:  inner membrane    integral to membrane    light-harvesting complex (sensu Proteobacteria)    electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity    photosynthesis, light reaction    CHAIN: F SWISS-PROT/TREMBL: P26790    KEYWORD: 3D-structure    Antenna complex    Bacteriochlorophyll    Inner membrane    Light-harvesting polypeptide    Magnesium    Transmembrane    SCOP: f.3.1.1 Membrane and cell surface proteins and peptides    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Light-harvesting complex subunits    Purple bacterium (Rhodopseudomonas acidophila) GO:  inner membrane    integral to membrane    light-harvesting complex (sensu Proteobacteria)    electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity    photosynthesis, light reaction

Image Source: PDB

Loops in ArchDB40 clusters

1nkz_A_12 - HH => SUBCLASS : 1.2.18

Loops in ArchDB95 clusters

1nkz_A_12 - HH => SUBCLASS : 1.1.53
1nkz_A_12 - HH => SUBCLASS : 1.2.15

1ijd A - percentage of sequence identity: 67
1ijd C - percentage of sequence identity: 67
1ijd E - percentage of sequence identity: 67
1kzu A - percentage of sequence identity: 100
1kzu D - percentage of sequence identity: 100
1kzu G - percentage of sequence identity: 100
1nkz A - percentage of sequence identity: 100
1nkz C - percentage of sequence identity: 100
1nkz E - percentage of sequence identity: 100
null nu - percentage of sequence identity: 0