PDB: 1nl1 Compound: prothrombin Classification: HYDROLASE Entry date in PDB: 2003-09-16 Resolution [Å]: 1.90 R-Factor: 0.219

CHAIN: A SWISS-PROT/TREMBL: P00735    KEYWORD: 3D-structure    Acute phase    Blood coagulation    Calcium-binding    Gamma-carboxyglutamic acid    Glycoprotein    Hydrolase    Kringle    Plasma    Repeat    Serine protease    Signal    Vitamin K    Zymogen    EC: 3.4.21.5 SCOP: g.14.1.1 Small proteins    Kringle-like    Kringle-like    Kringle modules    Prothrombin    Cow (Bos taurus) SCOP: g.32.1.1 Small proteins    GLA-domain    GLA-domain    GLA-domain    Prothrombin    Cow (Bos taurus) GO:  extracellular region    calcium ion binding    chymotrypsin activity    thrombin activity    trypsin activity    blood coagulation    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB95 clusters

1nl1_A_126 - HA => SUBCLASS : 6.4.1

Loops in ArchDB-EC clusters

1nl1_A_126 - HA => SUBCLASS : 6.5.1

Loops not clustered in ArchDB

1nl1_A_126 - HA
1nl1_A_55 - HE
1nl1_A_35 - HH

1iod G - percentage of sequence identity: 68
1nl2 A - percentage of sequence identity: 100
2pf1 - - percentage of sequence identity: 100
2pf2 - - percentage of sequence identity: 100
2spt - - percentage of sequence identity: 100