PDB: 1nlq Compound: nucleoplasmin-like protein Classification: CHAPERONE, LIGAND BINDING Entry date in PDB: 2003-03-01 Resolution [Å]: 1.50 R-Factor: 0.234

CHAIN: A SWISS-PROT/TREMBL: Q27415    KEYWORD: 3D-structure    Alternative splicing    Nuclear protein    SCOP: b.121.3.1 All beta proteins    Nucleoplasmin-like/VP (viral coat and capsid proteins)    Nucleoplasmin-like core domain    Nucleoplasmin-like core domain    Chromatin decondensation protein 1 (Crp1, Nlp)    Fruit fly (Drosophila melanogaster) GO:  nucleus    nucleic acid binding    CHAIN: B SWISS-PROT/TREMBL: Q27415    KEYWORD: 3D-structure    Alternative splicing    Nuclear protein    SCOP: b.121.3.1 All beta proteins    Nucleoplasmin-like/VP (viral coat and capsid proteins)    Nucleoplasmin-like core domain    Nucleoplasmin-like core domain    Chromatin decondensation protein 1 (Crp1, Nlp)    Fruit fly (Drosophila melanogaster) GO:  nucleus    nucleic acid binding    CHAIN: C SWISS-PROT/TREMBL: Q27415    KEYWORD: 3D-structure    Alternative splicing    Nuclear protein    SCOP: b.121.3.1 All beta proteins    Nucleoplasmin-like/VP (viral coat and capsid proteins)    Nucleoplasmin-like core domain    Nucleoplasmin-like core domain    Chromatin decondensation protein 1 (Crp1, Nlp)    Fruit fly (Drosophila melanogaster) GO:  nucleus    nucleic acid binding    CHAIN: D SWISS-PROT/TREMBL: Q27415    KEYWORD: 3D-structure    Alternative splicing    Nuclear protein    SCOP: b.121.3.1 All beta proteins    Nucleoplasmin-like/VP (viral coat and capsid proteins)    Nucleoplasmin-like core domain    Nucleoplasmin-like core domain    Chromatin decondensation protein 1 (Crp1, Nlp)    Fruit fly (Drosophila melanogaster) GO:  nucleus    nucleic acid binding    CHAIN: E SWISS-PROT/TREMBL: Q27415    KEYWORD: 3D-structure    Alternative splicing    Nuclear protein    SCOP: b.121.3.1 All beta proteins    Nucleoplasmin-like/VP (viral coat and capsid proteins)    Nucleoplasmin-like core domain    Nucleoplasmin-like core domain    Chromatin decondensation protein 1 (Crp1, Nlp)    Fruit fly (Drosophila melanogaster) GO:  nucleus    nucleic acid binding

Image Source: PDB

Loops in ArchDB40 clusters

1nlq_A_48 - HA => SUBCLASS : 4.1.5
1nlq_A_79 - AR => SUBCLASS : 4.1.1
1nlq_A_4 - AR => SUBCLASS : 4.9.2
1nlq_A_31 - AR => SUBCLASS : 8.9.1

Loops in ArchDB95 clusters

1nlq_A_79 - AR => SUBCLASS : 4.1.1
1nlq_A_4 - AR => SUBCLASS : 4.39.1
1nlq_A_31 - AR => SUBCLASS : 8.18.1
1nlq_A_48 - HA => SUBCLASS : 4.1.7

Loops not clustered in ArchDB

1nlq_A_17 - AR
1nlq_A_60 - AR
1nlq_A_74 - AR
1nlq_A_86 - AR

1nlq A - percentage of sequence identity: 100
1nlq B - percentage of sequence identity: 100
1nlq C - percentage of sequence identity: 100
1nlq D - percentage of sequence identity: 100
1nlq E - percentage of sequence identity: 100