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Information on 1nu4
PDB: 1nu4
Compound: u1a RNA binding domain
Classification: RNA BINDING PROTEIN
Entry date in PDB: 2003-02-14
Resolution [Å]: 1.80
R-Factor: 0.203


CHAIN: A
SWISS-PROT/TREMBL: P09012
   KEYWORD: 3D-structure    Nuclear protein    Repeat    Ribonucleoprotein    RNA-binding    Spliceosome   
SCOP: d.58.7.1 Alpha and beta proteins (a+b)    Ferredoxin-like    RNA-binding domain, RBD    Canonical RBD    Splicesomal U1A protein    Human (Homo sapiens)
GO:  nucleic acid binding    nucleotide binding   


CHAIN: B
SWISS-PROT/TREMBL: P09012
   KEYWORD: 3D-structure    Nuclear protein    Repeat    Ribonucleoprotein    RNA-binding    Spliceosome   
SCOP: d.58.7.1 Alpha and beta proteins (a+b)    Ferredoxin-like    RNA-binding domain, RBD    Canonical RBD    Splicesomal U1A protein    Human (Homo sapiens)
GO:  nucleic acid binding    nucleotide binding   
1nu4 Image
Image Source: PDB

Stored Loops of 1nu4

Loops in ArchDB40 clusters

1nu4_A_23 - HE => SUBCLASS : 2.9.2
1nu4_A_76 - HA => SUBCLASS : 2.1.1
1nu4_A_55 - EH => SUBCLASS : 2.1.1
1nu4_A_40 - EH => SUBCLASS : 2.2.1

Loops in ArchDB95 clusters

1nu4_A_55 - EH => SUBCLASS : 2.1.1
1nu4_A_40 - EH => SUBCLASS : 2.2.1
1nu4_A_23 - HE => SUBCLASS : 2.8.4
1nu4_A_62 - HE => SUBCLASS : 3.8.1
1nu4_A_76 - HA => SUBCLASS : 2.1.1

Loops not clustered in ArchDB

1nu4_A_80 - AR
1nu4_A_11 - EH
1nu4_A_83 - EH
1nu4_A_47 - HE

Homologous structures to 1nu4 classified in ArchDB

1a9n B - percentage of sequence identity: 72
1a9n D - percentage of sequence identity: 72
1aud A - percentage of sequence identity: 100
1cx0 A - percentage of sequence identity: 100
1drz A - percentage of sequence identity: 100
1dz5 A - percentage of sequence identity: 100
1fht - - percentage of sequence identity: 97
1m5k C - percentage of sequence identity: 100
1m5k F - percentage of sequence identity: 100
1m5o C - percentage of sequence identity: 100
1m5o F - percentage of sequence identity: 100
1m5p C - percentage of sequence identity: 100
1m5p F - percentage of sequence identity: 100
1m5v C - percentage of sequence identity: 100
1m5v F - percentage of sequence identity: 100
1nu4 A - percentage of sequence identity: 100
1nu4 B - percentage of sequence identity: 100
1oia A - percentage of sequence identity: 97
1oia B - percentage of sequence identity: 97
1sj3 P - percentage of sequence identity: 100
1sj4 P - percentage of sequence identity: 100
1sjf A - percentage of sequence identity: 100
1u6b A - percentage of sequence identity: 100
1urn A - percentage of sequence identity: 100
1urn B - percentage of sequence identity: 100
1urn C - percentage of sequence identity: 100
1vbx A - percentage of sequence identity: 100
1vby A - percentage of sequence identity: 100
1vbz A - percentage of sequence identity: 100
1vc0 A - percentage of sequence identity: 100
1vc5 A - percentage of sequence identity: 100
1vc6 A - percentage of sequence identity: 100
1vc7 A - percentage of sequence identity: 100
1zzn A - percentage of sequence identity: 100