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Information on 1o6e
PDB: 1o6e
Compound: capsid protein p40
Classification: PROTEASE
Entry date in PDB: 2002-11-14
Resolution [Å]: 2.30
R-Factor: 0.197


CHAIN: A
SWISS-PROT/TREMBL: P03234
   KEYWORD: 3D-structure    Alternative initiation    Capsid assembly    Coat protein    Hydrolase    Serine protease   
EC: 3.4.21.97
SCOP: b.57.1.1 All beta proteins    Herpes virus serine proteinase, assemblin    Herpes virus serine proteinase, assemblin    Herpes virus serine proteinase, assemblin    Epstein-Barr virus protease    Human herpesvirus 4
GO:  serine-type endopeptidase activity    proteolysis and peptidolysis   


CHAIN: B
SWISS-PROT/TREMBL: P03234
   KEYWORD: 3D-structure    Alternative initiation    Capsid assembly    Coat protein    Hydrolase    Serine protease   
EC: 3.4.21.97
SCOP: b.57.1.1 All beta proteins    Herpes virus serine proteinase, assemblin    Herpes virus serine proteinase, assemblin    Herpes virus serine proteinase, assemblin    Epstein-Barr virus protease    Human herpesvirus 4
GO:  serine-type endopeptidase activity    proteolysis and peptidolysis   
1o6e Image
Image Source: PDB

Stored Loops of 1o6e

Loops in ArchDB95 clusters

1o6e_A_154 - EH => SUBCLASS : 2.1.8
1o6e_A_67 - EH => SUBCLASS : 2.3.3
1o6e_A_136 - AR => SUBCLASS : 10.15.1
1o6e_A_159 - HH => SUBCLASS : 5.2.1

Loops in ArchDB-EC clusters

1o6e_A_81 - HH => SUBCLASS : 1.2.16

Loops not clustered in ArchDB

1o6e_A_136 - AR
1o6e_A_7 - EH
1o6e_A_42 - HA
1o6e_A_114 - HA
1o6e_A_49 - HA
1o6e_A_42 - HA
1o6e_A_114 - HA
1o6e_A_49 - HA
1o6e_A_29 - HE
1o6e_A_103 - HE
1o6e_A_198 - HH
1o6e_A_171 - HH
1o6e_A_90 - HH
1o6e_A_76 - HH

Homologous structures to 1o6e classified in ArchDB

1o6e A - percentage of sequence identity: 100
1o6e B - percentage of sequence identity: 100