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Information on 1odv
PDB: 1odv
Compound: photoactive yellow protein
Classification: SIGNALLING
Entry date in PDB: 2003-03-18
Resolution [Å]: 1.14
R-Factor: 0.147


CHAIN: A
SWISS-PROT/TREMBL: P16113
   KEYWORD: 3D-structure    Chromophore    Photoreceptor   
SCOP: d.110.3.1 Alpha and beta proteins (a+b)    Profilin-like    PYP-like sensor domain (PAS domain)    PYP-like    Photoactive yellow protein, PYP    Ectothiorhodospira halophila
GO:  signal transducer activity    signal transduction   


CHAIN: B
SWISS-PROT/TREMBL: P16113
   KEYWORD: 3D-structure    Chromophore    Photoreceptor   
SCOP: d.110.3.1 Alpha and beta proteins (a+b)    Profilin-like    PYP-like sensor domain (PAS domain)    PYP-like    Photoactive yellow protein, PYP    Ectothiorhodospira halophila
GO:  signal transducer activity    signal transduction   
1odv Image
Image Source: PDB

Stored Loops of 1odv

Loops in ArchDB95 clusters

1odv_A_29 - HA => SUBCLASS : 3.1.1
1odv_A_103 - HA => SUBCLASS : 5.11.1

Loops not clustered in ArchDB

1odv_A_39 - EH
1odv_A_89 - HA
1odv_A_76 - HE
1odv_A_44 - HH
1odv_A_54 - HH

Homologous structures to 1odv classified in ArchDB

1d7e A - percentage of sequence identity: 100
1f98 A - percentage of sequence identity: 99
1f9i A - percentage of sequence identity: 99
1gsv A - percentage of sequence identity: 99
1gsw A - percentage of sequence identity: 99
1gsx A - percentage of sequence identity: 98
1kou A - percentage of sequence identity: 100
1nwz A - percentage of sequence identity: 100
1odv A - percentage of sequence identity: 100
1odv B - percentage of sequence identity: 100
1ot6 A - percentage of sequence identity: 99
1ot9 A - percentage of sequence identity: 100
1ota A - percentage of sequence identity: 99
1otb A - percentage of sequence identity: 100
1otd A - percentage of sequence identity: 96
1otd B - percentage of sequence identity: 96
1ote A - percentage of sequence identity: 99
1oti A - percentage of sequence identity: 99
1s1y A - percentage of sequence identity: 99
1s1z A - percentage of sequence identity: 99
1s4r A - percentage of sequence identity: 100
1s4s A - percentage of sequence identity: 100
1t18 A - percentage of sequence identity: 99
1t19 A - percentage of sequence identity: 99
1t1a A - percentage of sequence identity: 99
1t1b A - percentage of sequence identity: 99
1t1c A - percentage of sequence identity: 99
1ts0 A - percentage of sequence identity: 100
1ts6 A - percentage of sequence identity: 100
1ts7 A - percentage of sequence identity: 100
1ts8 A - percentage of sequence identity: 100
1ugu A - percentage of sequence identity: 99
1uwn X - percentage of sequence identity: 100
1xfn A - percentage of sequence identity: 100
1xfq A - percentage of sequence identity: 100
2phy - - percentage of sequence identity: 100
2pyp - - percentage of sequence identity: 100
2pyr - - percentage of sequence identity: 100
3phy - - percentage of sequence identity: 100
3pyp - - percentage of sequence identity: 100