PDB: 1ofm Compound: chondroitinase b Classification: LYASE Entry date in PDB: 2004-04-19 Resolution [Å]: 1.80 R-Factor: 0.142

CHAIN: A SWISS-PROT/TREMBL: Q46079    KEYWORD: 3D-structure    Glycoprotein    Lyase    Pyrrolidone carboxylic acid    Signal    3D-structure    Glycoprotein    Lyase    Pyrrolidone carboxylic acid    Signal    EC: 4.2.2.- SCOP: b.80.1.4 All beta proteins    Single-stranded right-handed beta-helix    Pectin lyase-like    Chondroitinase B    Chondroitinase B    Pedobacter heparinus GO:

Image Source: PDB

Loops in ArchDB40 clusters

1ofm_A_255 - AR => SUBCLASS : 1.2.1
1ofm_A_129 - AR => SUBCLASS : 1.2.1
1ofm_A_277 - AR => SUBCLASS : 1.2.1
1ofm_A_161 - AR => SUBCLASS : 1.2.1
1ofm_A_52 - AR => SUBCLASS : 1.2.1
1ofm_A_303 - AR => SUBCLASS : 1.2.1
1ofm_A_199 - AR => SUBCLASS : 1.2.1
1ofm_A_341 - AR => SUBCLASS : 1.2.1
1ofm_A_231 - AR => SUBCLASS : 1.2.1
1ofm_A_96 - AR => SUBCLASS : 1.2.1
1ofm_A_382 - AR => SUBCLASS : 1.2.1
1ofm_A_410 - AR => SUBCLASS : 1.2.1
1ofm_A_88 - AR => SUBCLASS : 4.11.1
1ofm_A_121 - AR => SUBCLASS : 4.11.1
1ofm_A_245 - AR => SUBCLASS : 5.20.1

Loops in ArchDB95 clusters

1ofm_A_129 - AR => SUBCLASS : 1.1.3
1ofm_A_255 - AR => SUBCLASS : 1.1.3
1ofm_A_161 - AR => SUBCLASS : 1.1.3
1ofm_A_52 - AR => SUBCLASS : 1.1.3
1ofm_A_382 - AR => SUBCLASS : 1.1.3
1ofm_A_199 - AR => SUBCLASS : 1.1.3
1ofm_A_410 - AR => SUBCLASS : 1.1.3
1ofm_A_277 - AR => SUBCLASS : 1.1.3
1ofm_A_231 - AR => SUBCLASS : 1.1.3
1ofm_A_96 - AR => SUBCLASS : 1.1.3
1ofm_A_303 - AR => SUBCLASS : 1.1.3
1ofm_A_341 - AR => SUBCLASS : 1.1.3
1ofm_A_88 - AR => SUBCLASS : 4.10.1
1ofm_A_245 - AR => SUBCLASS : 4.10.1
1ofm_A_121 - AR => SUBCLASS : 4.10.1
1ofm_A_346 - AR => SUBCLASS : 4.47.1
1ofm_A_260 - AR => SUBCLASS : 4.47.1
1ofm_A_245 - AR => SUBCLASS : 5.73.1

Loops not clustered in ArchDB

1ofm_A_46 - AR
1ofm_A_236 - AR
1ofm_A_267 - AR
1ofm_A_282 - AR
1ofm_A_295 - AR
1ofm_A_308 - AR
1ofm_A_321 - AR
1ofm_A_387 - AR
1ofm_A_399 - AR
1ofm_A_218 - AR
1ofm_A_204 - AR
1ofm_A_58 - AR
1ofm_A_71 - AR
1ofm_A_81 - AR
1ofm_A_102 - AR
1ofm_A_134 - AR
1ofm_A_146 - AR
1ofm_A_166 - AR
1ofm_A_177 - AR
1ofm_A_415 - EH
1ofm_A_353 - EH
1ofm_A_31 - HE
1ofm_A_361 - HE
1ofm_A_452 - HH
1ofm_A_467 - HH

1dbo A - percentage of sequence identity: 99
1ofl A - percentage of sequence identity: 100