PDB: 1onq Compound: t-cell surface glycoprotein cd1a Classification: IMMUNE SYSTEM Entry date in PDB: 2003-08-05 Resolution [Å]: 2.15 R-Factor: 0.229

CHAIN: A SWISS-PROT/TREMBL: P06126    KEYWORD: Glycoprotein    Immunoglobulin domain    Multigene family    Polymorphism    Signal    Transmembrane    SCOP: b.1.1.2 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    C1 set domains (antibody constant domain-like)    CD1, alpha-3 domain    Human (Homo sapiens), CD1a SCOP: d.19.1.1 Alpha and beta proteins (a+b)    MHC antigen-recognition domain    MHC antigen-recognition domain    MHC antigen-recognition domain    CD1, alpha-1 and alpha-2 domains    Human (Homo sapiens), CD1a GO:  MHC class I protein complex    MHC class I receptor activity    antigen presentation    CHAIN: C SWISS-PROT/TREMBL: P06126    KEYWORD: Glycoprotein    Immunoglobulin domain    Multigene family    Polymorphism    Signal    Transmembrane    SCOP: b.1.1.2 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    C1 set domains (antibody constant domain-like)    CD1, alpha-3 domain    Human (Homo sapiens), CD1a SCOP: d.19.1.1 Alpha and beta proteins (a+b)    MHC antigen-recognition domain    MHC antigen-recognition domain    MHC antigen-recognition domain    CD1, alpha-1 and alpha-2 domains    Human (Homo sapiens), CD1a GO:  MHC class I protein complex    MHC class I receptor activity    antigen presentation

Image Source: PDB

Loops in ArchDB95 clusters

1onq_A_225 - AR => SUBCLASS : 3.11.1
1onq_A_225 - AR => SUBCLASS : 3.11.2
1onq_A_201 - AR => SUBCLASS : 3.16.1
1onq_A_139 - HH => SUBCLASS : 1.1.11
1onq_A_178 - HE => SUBCLASS : 5.11.1
1onq_A_121 - HA => SUBCLASS : 2.1.1
1onq_A_108 - HA => SUBCLASS : 2.1.2
1onq_A_217 - HA => SUBCLASS : 2.3.2
1onq_A_23 - HA => SUBCLASS : 2.3.12
1onq_A_94 - HA => SUBCLASS : 2.5.3
1onq_A_236 - HA => SUBCLASS : 3.1.1
1onq_A_35 - HA => SUBCLASS : 4.1.1

Loops not clustered in ArchDB

1onq_A_231 - AR
1onq_A_243 - AR
1onq_A_46 - EH
1onq_A_130 - EH
1onq_A_8 - HA
1onq_A_259 - HA
1onq_A_188 - HA
1onq_A_60 - HE
1onq_A_152 - HH
1onq_A_165 - HH

1bmg - - percentage of sequence identity: 75
1gzp A - percentage of sequence identity: 63
1gzq A - percentage of sequence identity: 63
1onq A - percentage of sequence identity: 100
1onq C - percentage of sequence identity: 100
1uqs A - percentage of sequence identity: 63
1xz0 A - percentage of sequence identity: 100
1xz0 C - percentage of sequence identity: 100