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PDB code:
Information on 1oyp
PDB:
1oyp
Compound:
ribonuclease ph
Classification:
TRANSFERASE
Entry date in PDB:
2004-03-09
Resolution [Å]:
2.76
R-Factor:
0.285
CHAIN:
A
SWISS-PROT/TREMBL:
P28619
KEYWORD:
Complete proteome Nucleotidyltransferase Transferase tRNA processing
EC:
2.7.7.56
SCOP:
d.14.1.4
Alpha and beta proteins (a+b)
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribonuclease PH domain 1-like
Ribonuclease PH, domain 1
Bacillus subtilis
SCOP:
d.101.1.1
Alpha and beta proteins (a+b)
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH, domain 2
Bacillus subtilis
GO:
3'-5'-exoribonuclease activity
RNA binding
tRNA binding
tRNA-specific ribonuclease activity
RNA processing
tRNA processing
CHAIN:
B
SWISS-PROT/TREMBL:
P28619
KEYWORD:
Complete proteome Nucleotidyltransferase Transferase tRNA processing
EC:
2.7.7.56
SCOP:
d.14.1.4
Alpha and beta proteins (a+b)
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribonuclease PH domain 1-like
Ribonuclease PH, domain 1
Bacillus subtilis
SCOP:
d.101.1.1
Alpha and beta proteins (a+b)
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH, domain 2
Bacillus subtilis
GO:
3'-5'-exoribonuclease activity
RNA binding
tRNA binding
tRNA-specific ribonuclease activity
RNA processing
tRNA processing
CHAIN:
C
SWISS-PROT/TREMBL:
P28619
KEYWORD:
Complete proteome Nucleotidyltransferase Transferase tRNA processing
EC:
2.7.7.56
SCOP:
d.14.1.4
Alpha and beta proteins (a+b)
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribonuclease PH domain 1-like
Ribonuclease PH, domain 1
Bacillus subtilis
SCOP:
d.101.1.1
Alpha and beta proteins (a+b)
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH, domain 2
Bacillus subtilis
GO:
3'-5'-exoribonuclease activity
RNA binding
tRNA binding
tRNA-specific ribonuclease activity
RNA processing
tRNA processing
CHAIN:
D
SWISS-PROT/TREMBL:
P28619
KEYWORD:
Complete proteome Nucleotidyltransferase Transferase tRNA processing
EC:
2.7.7.56
SCOP:
d.14.1.4
Alpha and beta proteins (a+b)
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribonuclease PH domain 1-like
Ribonuclease PH, domain 1
Bacillus subtilis
SCOP:
d.101.1.1
Alpha and beta proteins (a+b)
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH, domain 2
Bacillus subtilis
GO:
3'-5'-exoribonuclease activity
RNA binding
tRNA binding
tRNA-specific ribonuclease activity
RNA processing
tRNA processing
CHAIN:
E
SWISS-PROT/TREMBL:
P28619
KEYWORD:
Complete proteome Nucleotidyltransferase Transferase tRNA processing
EC:
2.7.7.56
SCOP:
d.14.1.4
Alpha and beta proteins (a+b)
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribonuclease PH domain 1-like
Ribonuclease PH, domain 1
Bacillus subtilis
SCOP:
d.101.1.1
Alpha and beta proteins (a+b)
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH, domain 2
Bacillus subtilis
GO:
3'-5'-exoribonuclease activity
RNA binding
tRNA binding
tRNA-specific ribonuclease activity
RNA processing
tRNA processing
CHAIN:
F
SWISS-PROT/TREMBL:
P28619
KEYWORD:
Complete proteome Nucleotidyltransferase Transferase tRNA processing
EC:
2.7.7.56
SCOP:
d.14.1.4
Alpha and beta proteins (a+b)
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribonuclease PH domain 1-like
Ribonuclease PH, domain 1
Bacillus subtilis
SCOP:
d.101.1.1
Alpha and beta proteins (a+b)
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH domain 2-like
Ribonuclease PH, domain 2
Bacillus subtilis
GO:
3'-5'-exoribonuclease activity
RNA binding
tRNA binding
tRNA-specific ribonuclease activity
RNA processing
tRNA processing
Image Source:
PDB
Homologous structures to 1oyp classified in ArchDB
1udn
A - percentage of sequence identity: 63
1uds
A - percentage of sequence identity: 63