ArchDB - Biological DataBase of Protein Loops

Information on 1p80

PDB: 1p80
Compound: catalase hpii
Classification: OXIDOREDUCTASE
Entry date in PDB: 2003-09-09
Resolution [Å]: 1.65
R-Factor: 0.170

CHAIN: A

SWISS-PROT/TREMBL: P21179
   KEYWORD: 3D-structure    Complete proteome    Heme    Hydrogen peroxide    Iron    Oxidoreductase    Peroxidase
EC: 1.11.1.6
SCOP: c.23.16.3 Alpha and beta proteins (a/b)    Flavodoxin-like    Class I glutamine amidotransferase-like    Catalase, C-terminal domain    Catalase, C-terminal domain    Escherichia coli, HPII
SCOP: e.5.1.1 Multi-domain proteins (alpha and beta)    Heme-dependent catalases    Heme-dependent catalases    Heme-dependent catalases    Catalase II    Escherichia coli, HPII
GO:  catalase activity    heme binding    iron ion binding    electron transport    response to oxidative stress

CHAIN: B

CHAIN: C

CHAIN: D

Image Source: PDB

Stored Loops of 1p80

Loops in ArchDB95 clusters

1p80_A_718 - EH => SUBCLASS : 4.8.4
1p80_A_367 - EH => SUBCLASS : 4.9.1
1p80_A_286 - EH => SUBCLASS : 8.3.1
1p80_A_194 - EH => SUBCLASS : 9.4.1
1p80_A_647 - AR => SUBCLASS : 2.1.1
1p80_A_271 - AR => SUBCLASS : 4.18.1
1p80_A_652 - AR => SUBCLASS : 10.7.1
1p80_A_673 - HH => SUBCLASS : 1.1.2
1p80_A_304 - HH => SUBCLASS : 1.2.5
1p80_A_237 - HH => SUBCLASS : 1.2.8
1p80_A_506 - HH => SUBCLASS : 2.1.1
1p80_A_517 - HH => SUBCLASS : 3.5.1
1p80_A_552 - HH => SUBCLASS : 5.1.3
1p80_A_552 - HH => SUBCLASS : 5.4.2
1p80_A_613 - HE => SUBCLASS : 1.1.1
1p80_A_679 - HE => SUBCLASS : 2.1.1
1p80_A_317 - HE => SUBCLASS : 4.66.1
1p80_A_639 - HA => SUBCLASS : 3.1.1
1p80_A_277 - HA => SUBCLASS : 5.1.6

Loops in ArchDB-EC clusters

1p80_A_552 - HH => SUBCLASS : 5.4.1

Loops not clustered in ArchDB

1p80_A_629 - AR
1p80_A_271 - AR
1p80_A_652 - AR
1p80_A_647 - AR
1p80_A_629 - AR
1p80_A_400 - EH
1p80_A_664 - EH
1p80_A_333 - HA
1p80_A_639 - HA
1p80_A_183 - HA
1p80_A_160 - HA
1p80_A_131 - HA
1p80_A_695 - HA
1p80_A_277 - HA
1p80_A_333 - HA
1p80_A_183 - HA
1p80_A_695 - HA
1p80_A_131 - HA
1p80_A_160 - HA
1p80_A_568 - HE
1p80_A_108 - HE
1p80_A_250 - HE
1p80_A_382 - HE
1p80_A_726 - HH
1p80_A_53 - HH
1p80_A_214 - HH
1p80_A_406 - HH
1p80_A_63 - HH

Homologous structures to 1p80 classified in ArchDB

1cf9 A - percentage of sequence identity: 99
1cf9 B - percentage of sequence identity: 99
1cf9 C - percentage of sequence identity: 99
1cf9 D - percentage of sequence identity: 99
1gg9 A - percentage of sequence identity: 99
1gg9 B - percentage of sequence identity: 99
1gg9 C - percentage of sequence identity: 99
1gg9 D - percentage of sequence identity: 99
1gge A - percentage of sequence identity: 99
1gge B - percentage of sequence identity: 99
1gge C - percentage of sequence identity: 99
1gge D - percentage of sequence identity: 99
1ggf A - percentage of sequence identity: 99
1ggf B - percentage of sequence identity: 99
1ggf C - percentage of sequence identity: 99
1ggf D - percentage of sequence identity: 99
1ggh A - percentage of sequence identity: 99
1ggh B - percentage of sequence identity: 99
1ggh C - percentage of sequence identity: 99
1ggh D - percentage of sequence identity: 99
1ggj A - percentage of sequence identity: 99
1ggj B - percentage of sequence identity: 99
1ggj C - percentage of sequence identity: 99
1ggj D - percentage of sequence identity: 99
1ggk A - percentage of sequence identity: 99
1ggk B - percentage of sequence identity: 99
1ggk C - percentage of sequence identity: 99
1ggk D - percentage of sequence identity: 99
1iph A - percentage of sequence identity: 99
1iph B - percentage of sequence identity: 99
1iph C - percentage of sequence identity: 99
1iph D - percentage of sequence identity: 99
1p7y A - percentage of sequence identity: 99
1p7y B - percentage of sequence identity: 99
1p7y C - percentage of sequence identity: 99
1p7y D - percentage of sequence identity: 99
1p7z A - percentage of sequence identity: 99
1p7z B - percentage of sequence identity: 99
1p7z C - percentage of sequence identity: 99
1p7z D - percentage of sequence identity: 99
1p80 A - percentage of sequence identity: 100
1p80 B - percentage of sequence identity: 100
1p80 C - percentage of sequence identity: 100
1p80 D - percentage of sequence identity: 100
1p81 A - percentage of sequence identity: 99
1p81 B - percentage of sequence identity: 99
1p81 C - percentage of sequence identity: 99
1p81 D - percentage of sequence identity: 99
1qf7 A - percentage of sequence identity: 99
1qf7 B - percentage of sequence identity: 99
1qf7 C - percentage of sequence identity: 99
1qf7 D - percentage of sequence identity: 99
1qws A - percentage of sequence identity: 99
1qws B - percentage of sequence identity: 99
1qws C - percentage of sequence identity: 99
1qws D - percentage of sequence identity: 99
1ye9 A - percentage of sequence identity: 99
1ye9 B - percentage of sequence identity: 99
1ye9 C - percentage of sequence identity: 99
1ye9 D - percentage of sequence identity: 99
1ye9 E - percentage of sequence identity: 100
1ye9 F - percentage of sequence identity: 100
1ye9 G - percentage of sequence identity: 100
1ye9 H - percentage of sequence identity: 100
1ye9 I - percentage of sequence identity: 99
1ye9 J - percentage of sequence identity: 99
1ye9 K - percentage of sequence identity: 99
1ye9 L - percentage of sequence identity: 99
1ye9 M - percentage of sequence identity: 100
1ye9 N - percentage of sequence identity: 100
1ye9 O - percentage of sequence identity: 100
1ye9 P - percentage of sequence identity: 100