PDB: 1p9s Compound: replicase polyprotein 1ab Classification: HYDROLASE Entry date in PDB: 2003-05-20 Resolution [Å]: 2.54 R-Factor: 0.201

CHAIN: A SWISS-PROT/TREMBL: Q05002    KEYWORD: 3D-structure    ATP-binding    Helicase    Hydrolase    Metal-binding    Polyprotein    Repeat    Ribosomal frameshift    RNA-directed RNA polymerase    Thiol protease    Transferase    Transmembrane    Zinc    Zinc-finger    EC: 2.7.7.48 SCOP: b.47.1.4 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral cysteine protease of trypsin fold    Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2)    Human coronavirus GO:  ATP binding    RNA binding    RNA-directed RNA polymerase activity    transcription    viral genome replication    viral life cycle    viral protein processing    CHAIN: B SWISS-PROT/TREMBL: Q05002    KEYWORD: 3D-structure    ATP-binding    Helicase    Hydrolase    Metal-binding    Polyprotein    Repeat    Ribosomal frameshift    RNA-directed RNA polymerase    Thiol protease    Transferase    Transmembrane    Zinc    Zinc-finger    EC: 2.7.7.48 SCOP: b.47.1.4 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral cysteine protease of trypsin fold    Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2)    Human coronavirus GO:  ATP binding    RNA binding    RNA-directed RNA polymerase activity    transcription    viral genome replication    viral life cycle    viral protein processing

Image Source: PDB

Loops in ArchDB-EC clusters

1p9s_A_11 - HE => SUBCLASS : 0.1.20

Loops not clustered in ArchDB

1p9s_A_155 - AR
1p9s_A_121 - AR
1p9s_A_85 - AR
1p9s_A_100 - AR
1p9s_A_35 - EH
1p9s_A_171 - EH
1p9s_A_76 - HA
1p9s_A_111 - HA
1p9s_A_148 - HA
1p9s_A_72 - HA
1p9s_A_65 - HA
1p9s_A_25 - HA
1p9s_A_17 - HA
1p9s_A_164 - HA
1p9s_A_53 - HE
1p9s_A_258 - HH
1p9s_A_249 - HH
1p9s_A_226 - HH
1p9s_A_200 - HH

1lvo A - percentage of sequence identity: 61
1lvo B - percentage of sequence identity: 61
1lvo C - percentage of sequence identity: 61
1lvo D - percentage of sequence identity: 61
1lvo E - percentage of sequence identity: 61
1lvo F - percentage of sequence identity: 61
1p9s A - percentage of sequence identity: 100
1p9s B - percentage of sequence identity: 100
1p9u A - percentage of sequence identity: 61
1p9u B - percentage of sequence identity: 61
1p9u C - percentage of sequence identity: 61
1p9u D - percentage of sequence identity: 61
1p9u E - percentage of sequence identity: 61
1p9u F - percentage of sequence identity: 61
2amp A - percentage of sequence identity: 61
2amp B - percentage of sequence identity: 61