PDB: 1pd2 Compound: hematopoietic prostagladin d synthase Classification: LIGASE Entry date in PDB: 1999-10-13 Resolution [Å]: 2.30 R-Factor: 0.204

CHAIN: 1 SWISS-PROT/TREMBL: O35543    KEYWORD: 3D-structure    Isomerase    Prostaglandin biosynthesis    EC: 5.3.99.2 SCOP: a.45.1.1 All alpha proteins    Glutathione S-transferase (GST), C-terminal domain    Glutathione S-transferase (GST), C-terminal domain    Glutathione S-transferase (GST), C-terminal domain    Class sigma GST    Rat (Rattus norvegicus) SCOP: c.47.1.5 Alpha and beta proteins (a/b)    Thioredoxin fold    Thioredoxin-like    Glutathione S-transferase (GST), N-terminal domain    Class sigma GST    Rat (Rattus norvegicus) GO:   CHAIN: 2 SWISS-PROT/TREMBL: O35543    KEYWORD: 3D-structure    Isomerase    Prostaglandin biosynthesis    EC: 5.3.99.2 SCOP: a.45.1.1 All alpha proteins    Glutathione S-transferase (GST), C-terminal domain    Glutathione S-transferase (GST), C-terminal domain    Glutathione S-transferase (GST), C-terminal domain    Class sigma GST    Rat (Rattus norvegicus) SCOP: c.47.1.5 Alpha and beta proteins (a/b)    Thioredoxin fold    Thioredoxin-like    Glutathione S-transferase (GST), N-terminal domain    Class sigma GST    Rat (Rattus norvegicus) GO:

Image Source: PDB

Loops in ArchDB95 clusters

1pd2_1_30 - EH => SUBCLASS : 1.1.12
1pd2_1_4 - EH => SUBCLASS : 4.25.1
1pd2_1_148 - HH => SUBCLASS : 8.3.1
1pd2_1_16 - HE => SUBCLASS : 3.5.3
1pd2_1_16 - HE => SUBCLASS : 3.5.5
1pd2_1_39 - HE => SUBCLASS : 7.15.1
1pd2_1_53 - HA => SUBCLASS : 2.1.1

Loops in ArchDB-EC clusters

1pd2_1_148 - HH => SUBCLASS : 8.1.1

Loops not clustered in ArchDB

1pd2_1_59 - EH
1pd2_1_53 - HA
1pd2_1_64 - HH
1pd2_1_82 - HH
1pd2_1_109 - HH
1pd2_1_124 - HH
1pd2_1_172 - HH

1iyh A - percentage of sequence identity: 80
1iyh B - percentage of sequence identity: 80
1iyh C - percentage of sequence identity: 80
1iyh D - percentage of sequence identity: 80
1iyi A - percentage of sequence identity: 80
1iyi B - percentage of sequence identity: 80
1iyi C - percentage of sequence identity: 80
1iyi D - percentage of sequence identity: 80
1pd2 1 - percentage of sequence identity: 100
1pd2 2 - percentage of sequence identity: 100
1v40 A - percentage of sequence identity: 80
1v40 B - percentage of sequence identity: 80
1v40 C - percentage of sequence identity: 80
1v40 D - percentage of sequence identity: 80