PDB: 1pdu Compound: nuclear hormone receptor hr38 Classification: HORMONE/GROWTH FACTOR RECEPTOR Entry date in PDB: 2003-06-10 Resolution [Å]: 2.30 R-Factor: 0.210

CHAIN: A SWISS-PROT/TREMBL: P49869    KEYWORD: 3D-structure    Alternative splicing    Developmental protein    DNA-binding    Nuclear protein    Receptor    Transcription regulation    Zinc-finger    3D-structure    Alternative splicing    Developmental protein    DNA-binding    Nuclear protein    Receptor    Transcription regulation    Zinc-finger    SCOP: a.123.1.1 All alpha proteins    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Nuclear hormone receptor HR38    Fruit fly (Drosophila melanogaster) GO:  nucleus    DNA binding    ligand-dependent nuclear receptor activity    steroid hormone receptor activity    transcription factor activity    regulation of transcription, DNA-dependent    CHAIN: B SWISS-PROT/TREMBL: P49869    KEYWORD: 3D-structure    Alternative splicing    Developmental protein    DNA-binding    Nuclear protein    Receptor    Transcription regulation    Zinc-finger    SCOP: a.123.1.1 All alpha proteins    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Nuclear hormone receptor HR38    Fruit fly (Drosophila melanogaster) GO:  nucleus    DNA binding    ligand-dependent nuclear receptor activity    steroid hormone receptor activity    transcription factor activity    regulation of transcription, DNA-dependent

Image Source: PDB

Loops in ArchDB40 clusters

1pdu_A_414 - HA => SUBCLASS : 3.1.1
1pdu_A_474 - HH => SUBCLASS : 1.1.2
1pdu_A_474 - HH => SUBCLASS : 1.2.2
1pdu_A_425 - HH => SUBCLASS : 1.4.6
1pdu_A_511 - HH => SUBCLASS : 6.6.1
1pdu_A_352 - HH => SUBCLASS : 8.2.1

Loops in ArchDB95 clusters

1pdu_A_474 - HH => SUBCLASS : 1.1.5
1pdu_A_474 - HH => SUBCLASS : 1.1.8
1pdu_A_511 - HH => SUBCLASS : 6.1.1
1pdu_A_352 - HH => SUBCLASS : 8.1.1
1pdu_A_414 - HA => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1pdu_A_422 - EH
1pdu_A_385 - HE
1pdu_A_322 - HH
1pdu_A_435 - HH
1pdu_A_453 - HH
1pdu_A_496 - HH
1pdu_A_504 - HH

1pdu A - percentage of sequence identity: 100
1pdu B - percentage of sequence identity: 100