PDB: 1pe1 Compound: 2-dehydro-3-deoxyphosphooctonate aldolase Classification: LYASE Entry date in PDB: 2004-02-03 Resolution [Å]: 1.74 R-Factor: 0.193

CHAIN: A SWISS-PROT/TREMBL: O66496    KEYWORD: 3D-structure    Complete proteome    Lipopolysaccharide biosynthesis    Transferase    EC: 2.5.1.55 SCOP: c.1.10.4 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Aldolase    Class I DAHP synthetase    3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase)    Aquifex aeolicus GO:  cytoplasm    3-deoxy-8-phosphooctulonate synthase activity    biosynthesis    metabolism    CHAIN: B SWISS-PROT/TREMBL: O66496    KEYWORD: 3D-structure    Complete proteome    Lipopolysaccharide biosynthesis    Transferase    EC: 2.5.1.55 SCOP: c.1.10.4 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Aldolase    Class I DAHP synthetase    3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase)    Aquifex aeolicus GO:  cytoplasm    3-deoxy-8-phosphooctulonate synthase activity    biosynthesis    metabolism

Image Source: PDB

Loops in ArchDB40 clusters

1pe1_A_1156 - HA => SUBCLASS : 3.13.1
1pe1_A_1238 - EH => SUBCLASS : 0.1.14
1pe1_A_1163 - EH => SUBCLASS : 1.1.43
1pe1_A_1238 - EH => SUBCLASS : 1.3.1
1pe1_A_1004 - EH => SUBCLASS : 5.52.1
1pe1_A_1149 - AR => SUBCLASS : 2.6.2

Loops in ArchDB95 clusters

1pe1_A_1238 - EH => SUBCLASS : 0.1.9
1pe1_A_1163 - EH => SUBCLASS : 1.1.34
1pe1_A_1238 - EH => SUBCLASS : 1.2.1
1pe1_A_1077 - EH => SUBCLASS : 2.1.21
1pe1_A_1004 - EH => SUBCLASS : 4.13.1
1pe1_A_1120 - EH => SUBCLASS : 6.2.4
1pe1_A_1149 - AR => SUBCLASS : 2.10.1
1pe1_A_1156 - HA => SUBCLASS : 3.14.1

Loops not clustered in ArchDB

1pe1_A_1036 - EH
1pe1_A_1097 - EH
1pe1_A_1178 - EH
1pe1_A_1218 - HA
1pe1_A_1169 - HE
1pe1_A_1135 - HE
1pe1_A_1108 - HE
1pe1_A_1088 - HE
1pe1_A_1060 - HE
1pe1_A_1016 - HE
1pe1_A_1204 - HE

1fwn A - percentage of sequence identity: 100
1fwn B - percentage of sequence identity: 100
1fws A - percentage of sequence identity: 100
1fws B - percentage of sequence identity: 100
1fwt A - percentage of sequence identity: 100
1fwt B - percentage of sequence identity: 100
1fww A - percentage of sequence identity: 100
1fww B - percentage of sequence identity: 100
1fx6 A - percentage of sequence identity: 100
1fx6 B - percentage of sequence identity: 100
1fxp A - percentage of sequence identity: 100
1fxp B - percentage of sequence identity: 100
1fxq A - percentage of sequence identity: 100
1fxq B - percentage of sequence identity: 100
1fy6 A - percentage of sequence identity: 100
1fy6 B - percentage of sequence identity: 100
1jcx A - percentage of sequence identity: 100
1jcx B - percentage of sequence identity: 100
1jcy A - percentage of sequence identity: 100
1jcy B - percentage of sequence identity: 100
1lrn A - percentage of sequence identity: 99
1lrn B - percentage of sequence identity: 99
1lro A - percentage of sequence identity: 99
1lro B - percentage of sequence identity: 99
1lrq A - percentage of sequence identity: 99
1lrq B - percentage of sequence identity: 99
1pck A - percentage of sequence identity: 100
1pck B - percentage of sequence identity: 100
1pcw A - percentage of sequence identity: 100
1pcw B - percentage of sequence identity: 100
1pe1 A - percentage of sequence identity: 100
1pe1 B - percentage of sequence identity: 100
1t8x A - percentage of sequence identity: 99
1t8x B - percentage of sequence identity: 99
1t96 A - percentage of sequence identity: 99
1t96 B - percentage of sequence identity: 99
1t99 A - percentage of sequence identity: 99
1t99 B - percentage of sequence identity: 99
1zha A - percentage of sequence identity: 99
1zha B - percentage of sequence identity: 99
1zji A - percentage of sequence identity: 99
1zji B - percentage of sequence identity: 99