PDB: 1prz Compound: ribosomal large subunit pseudouridine synthase d Classification: LYASE Entry date in PDB: 2003-11-04 Resolution [Å]: 1.80 R-Factor: 0.218

CHAIN: A SWISS-PROT/TREMBL: Q8X9F0    KEYWORD: Complete proteome    Lyase    RNA-binding    rRNA processing    EC: 4.2.1.70 SCOP: d.265.1.3 Alpha and beta proteins (a+b)    Pseudouridine synthase    Pseudouridine synthase    Pseudouridine synthase RsuA/RluD    Ribosomal large subunit pseudouridine synthase D, RluD    Escherichia coli GO:  pseudouridine synthase activity    pseudouridylate synthase activity    RNA binding    RNA processing

Image Source: PDB

Loops in ArchDB40 clusters

1prz_A_152 - HE => SUBCLASS : 4.43.1
1prz_A_86 - HA => SUBCLASS : 2.2.5
1prz_A_148 - EH => SUBCLASS : 2.1.1

Loops in ArchDB95 clusters

1prz_A_148 - EH => SUBCLASS : 2.1.2
1prz_A_152 - HE => SUBCLASS : 4.65.1
1prz_A_152 - HE => SUBCLASS : 6.20.1
1prz_A_86 - HA => SUBCLASS : 2.2.5

Loops in ArchDB-EC clusters

1prz_A_152 - HE => SUBCLASS : 4.49.2

Loops not clustered in ArchDB

1prz_A_170 - AR
1prz_A_170 - AR
1prz_A_143 - AR
1prz_A_143 - AR
1prz_A_93 - EH
1prz_A_221 - EH
1prz_A_279 - EH
1prz_A_209 - HA
1prz_A_183 - HA
1prz_A_86 - HA
1prz_A_209 - HA
1prz_A_183 - HA
1prz_A_115 - HE
1prz_A_265 - HE
1prz_A_307 - HH
1prz_A_235 - HH

1qyu A - percentage of sequence identity: 99
1v9f A - percentage of sequence identity: 99